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Related papers: Complexes of DNA Bases and Small Gold Clusters

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We study the structure and energetics of Au$_N$ clusters by means of parameter-free density-functional calculations ($N\le 8$), jellium calculations ($N\le 60$), embedded-atom calculations ($N\le 150$), and parameterized density-functional…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 Denitsa Alamanova , Yi Dong , Habib ur Rehman , Michael Springborg , Valeri G. Grigoryan

The programmable assembly of DNA strands is a promising tool for building tailored bottom-up nanostructures. Here, we present a plasmonic nanosystem obtained by the base-pairing mediated aggregation of gold nanoparticles (NPs) which are…

Applied Physics · Physics 2019-12-03 D. Caprara , F. Ripanti , A. Capocefalo , A. Sarra , F. Brasili , C. Petrillo , C. Fasolato , P. Postorino

Thiolate-protected gold nanoclusters represent atomically well-defined active centers for catalysis with resolved crystal structures, enabling the creation of a homogeneous and defined surface. The correlation of characterization via FT-IR…

Chemical Physics · Physics 2018-11-07 Dilek Demir

This study investigates the dynamic control of third-order nonlinear optical absorption properties of gold nanoparticles (AuNPs) dispersed in nematic liquid crystals (LC). By leveraging the reconfigurable nature of liquid crystals under…

Soft Condensed Matter · Physics 2025-02-17 Shengwei Wang , Mohamed Amine Gharbi , Chandra S Yelleswarapu

Atomic Force Microscopy analysis is employed to study the geometrical and topological properties of $3000$kbp DNA molecules fixed in mica substrates with $MgCl_{2}$. We found that the aggregates on the substrate surface for certain salt…

Soft Condensed Matter · Physics 2017-06-09 Elsa de la Calleja , R. F Bazoni , M. S. Rocha , Marcia Barbosa

In recent years there have been a number of proposals to utilize the specificity of DNA based interactions for potential applications in nanoscience. One interesting direction is the self-assembly of micro- and nanoparticle clusters using…

Soft Condensed Matter · Physics 2009-11-13 Nicholas A. Licata , Alexei V. Tkachenko

A new type of metabolizable and efficient radiosensitizer for cancer radiotherapy is presented in this study by combining ultrasmall Au nanoclusters (NCs, <2 nm) with biocompatible coating ligands (glutathione, GSH). The new nano-construct…

Gold-molecule-gold junctions can be formed by carefully breaking a gold wire in a solution containing dithiolated molecules. Surprisingly, there is little understanding on the mechanical details of the bridge formation process and…

Mesoscale and Nanoscale Physics · Physics 2008-10-10 Everardus H. Huisman , Marius L. Trouwborst , Frank L. Bakker , Bert de Boer , Bart J. van Wees , Sense J. van der Molen

Table of Content 1. Introduction 2. DNA fundamentals 3. Attachment of DNA to surface 4. Fabrication of nanostructures using DNA 4.1 Nanostructures of pure DNA 4.2 DNA-based assembly of metal nanoparticles 4.3 Construction of semiconductor…

Biological Physics · Physics 2007-05-23 Young Sun , Ching-Hwa Kiang

Gold-silica hybrids are appealing in different fields of applications like catalysis, sensors, drug delivery, and biotechnology. In most cases, the morphology and distribution of the hetero-units play significant roles in their functional…

Materials Science · Physics 2015-03-04 Paromita Kundu , Hamed Heidari , Sara Bals , N. Ravishankar , Gustaaf Van Tendeloo

The formation of polaron and its migration in a DNA chain are studied within a semiclassical Peyrard-Biship-Holstein polaron model. Comparing the energetics of the polaron system found from the quantum chemical and semiclassical…

Soft Condensed Matter · Physics 2007-09-10 Dr Julia A. Berashevich , Vadim Apalkov , Tapash Chakraborty

Samples of Au clusters deposited by laser ablation on an amorphous-carbon substrate are investigated. After a few months storage at room temperature the initially statistically distributed clusters are found to be collected in agglomerates…

Materials Science · Physics 2009-11-10 Ralph Werner , Matthias Wanner , Guenter Schneider , Dagmar Gerthsen

The diffusive motion of metal nanoparticles Au and Ag on monolayer and between bilayer heterostructures of transition metal dichalcogenides and graphene are investigated in the framework of density functional theory. We found that the…

Mesoscale and Nanoscale Physics · Physics 2015-06-01 F. Iyikanat , H. Sahin , R. T. Senger , F. M. Peeters

The pair interaction between two stiff parallel linear DNA molecules depends not only on the distance between their axes but on their azimuthal orientation. The positional and orientational order in columnar B-DNA assemblies in solution is…

Soft Condensed Matter · Physics 2009-11-07 H. M. Harreis , A. A. Kornyshev , C. N. Likos , H. Loewen , G. Sutmann

We report on our theoretical investigations of the electronic states in a DNA molecule. We have used a two-leg charge ladder model where electron-electron interactions and the electron spin have been taken into account. The energy spectra…

Disordered Systems and Neural Networks · Physics 2009-11-10 V. M. Apalkov , Tapash Chakraborty

When multivalent salts are added to dilute DNA solution, the DNA chains condense into bundles of a well-defined size. We explore two physical problems motivated by this phenomenon: the origin of the attractive interactions between the…

Soft Condensed Matter · Physics 2007-05-23 Bae-Yeun Ha , Andrea J. Liu

Background: The four-neutron correlation has been attracting much attention for decades. In addition to the study on the tetra-neutron system, it is worthwhile to investigate the correlation in bound systems. Purpose: The $^8$He nucleus is…

Nuclear Theory · Physics 2023-08-02 Y. Yamaguchi , W. Horiuchi , T. Ichikawa , N. Itagaki

We report the results of molecular dynamics simulations of the properties of a pseudo-atom model of dodecane thiol ligated 5-nm diameter gold nanoparticles (AuNP) in vacuum as a function of ligand coverage and particle separation in three…

Chemical Physics · Physics 2019-02-20 Christopher Liepold , Alex Smith , Binhua Lin , Juan de Pablo , Stuart A. Rice

We study theoretically a binary system in which an attraction of unlike particles is combined with a type-independent soft core repulsion. The possible experimental implementation of the system is a mixture of DNA-covered colloids, in which…

Soft Condensed Matter · Physics 2007-05-23 Alexei V. Tkachenko

We develop a simple model for the formation energies (FEs) of alkali and lkaline earth alanates and boranates, based upon ionic bonding between metal cations and (AlH4)- or (BH4)- anions. The FEs agree well with values obtained from first…

Materials Science · Physics 2007-06-28 M. J. van Setten , G. A. de Wijs , G. Brocks
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