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The Poisson-Boltzmann (PB) theory is widely used to depict ionic systems. As a mean-field theory, the PB theory neglects the correlation effect in the ionic atmosphere and leads to deviations from experimental results as the concentration…

Soft Condensed Matter · Physics 2019-06-25 Mao Su , Zhijie Xu , Yanting Wang

The Poisson-Boltzmann equation offers an efficient way to study electrostatics in molecular settings. Its numerical solution with the boundary element method is widely used, as the complicated molecular surface is accurately represented by…

Numerical Analysis · Mathematics 2021-08-25 Stefan D. Search , Christopher D. Cooper , Elwin van't Wout

When continuous rotational invariance of a two-dimensional fluid is broken to the discrete, dihedral subgroup $D_6$ - the point group of an equilateral triangle - the resulting anisotropic hydrodynamics breaks both spatial-inversion and…

Strongly Correlated Electrons · Physics 2023-05-31 Aaron J. Friedman , Caleb Q. Cook , Andrew Lucas

We introduce an effective action for non-dissipative magnetohydrodynamics. A crucial guiding principle is the generalized global symmetry of electrodynamics, which naturally leads to introducing a "dual photon" as the degree of freedom…

High Energy Physics - Theory · Physics 2018-11-13 Paolo Glorioso , Dam Thanh Son

We consider the two-dimensional water-wave problem with a general non-zero vorticity field in a fluid volume with a flat bed and a free surface. The nonlinear equations of motion for the chosen surface and volume variables are expressed…

Analysis of PDEs · Mathematics 2024-09-04 Delia Ionescu-Kruse , Rossen Ivanov

We have developed and implemented an implicit electrolyte model in the Vienna Ab initio Simulation Package (VASP) that includes nonlinear dielectric and ionic responses as well as a nonlocal definition of the cavities defining the spatial…

Chemical Physics · Physics 2023-09-15 S M Rezwanul Islam , Foroogh Khezeli , Stefan Ringe , Craig Plaisance

We propose a coordinate-invariant geometric formulation of the GENERIC stochastic differential equation, unifying reversible Hamiltonian and irreversible dissipative dynamics within a differential-geometric framework. Our construction…

Dynamical Systems · Mathematics 2025-10-14 Mark A. Peletier , Marcello Seri

The molecular density functional theory of fluids provides an exact theory for computing solvation free energies in implicit solvents. One of the reasons it has not received nearly as much attention as quantum density functional theory for…

Statistical Mechanics · Physics 2019-02-04 David M. Rogers

In article the following tasks on computer modeling of electric fields are analyzed: 1) calculation of distribution of potential for the field created by two parallel plates and charged bodies in the non-uniform environment; 2) calculation…

Other Computer Science · Computer Science 2013-12-16 Robert V Mayer

The dissipative properties of spatially nonlocal conductors are investigated in the context of quantum friction acting on an atom moving above a macroscopic body. The focus is on an extended version of the hydrodynamic model for the bulk…

Mesoscale and Nanoscale Physics · Physics 2019-03-25 Daniel Reiche , Marty Oelschläger , Kurt Busch , Francesco Intravaia

A novel energy minimization formulation of electrostatics that allows computation of the electrostatic energy and forces to any desired accuracy in a system with arbitrary dielectric properties is presented. An integral equation for the…

Classical Physics · Physics 2009-11-13 O. I. Obolensky , T. P. Doerr , R. Ray , Yi-Kuo Yu

The work reviews on a general level various modified Poisson-Boltzmann equations and demonstrates their use on the specific system of charged particles at an interface. This system is special, first, because it exhibits the long-range…

Soft Condensed Matter · Physics 2012-11-14 Derek Frydel , Martin Oettel

In this work we devise a theoretical and computational method to compute the elastic scattering of electrons from a non-spherical potential, such as in the case of molecules and molecular aggregates. Its main feature is represented by the…

Chemical Physics · Physics 2023-01-18 Francesca Triggiani , Tommaso Morresi , Simone Taioli , Stefano Simonucci

Most organic and inorganic surfaces (e.g., glass, nucleic acids or lipid membranes) become charged in aqueous solutions. The resulting ionic distribution induces effective interactions between the charged surfaces. Stacks of like-charged…

A flexoelectric peridynamic (PD) theory is proposed. Using the PD framework, the formulation introduces, perhaps for the first time, a nanoscale flexoelectric coupling that entails non-uniform strain in centrosymmetric dielectrics. This…

Computational Physics · Physics 2016-03-15 Pranesh Roy , Debasish Roy

Starting from the microscopic reduced Hartree-Fock equation, we derive the nanoscopic linearized Poisson-Boltzmann equation for the electrostatic potential associated with the electron density.

Mathematical Physics · Physics 2020-12-07 Ilias , Chenn , Israel Michael Sigal

This paper explores the application of Madelung hydrodynamic models to study two-dimensional electron gases, with a focus on nonlocal plasmonics and nonlinear optics. We begin by reviewing the derivation of the Madelung equations. Using the…

Mesoscale and Nanoscale Physics · Physics 2025-04-16 Simão S. Cardoso , A. J. Chaves , N. Asger Mortensen , N. M. R. Peres

At mesoscopic scales electrolyte solutions are modeled by the fluctuating generalized Poisson-Nernst-Planck (PNP) equations [J.-P. P\'eraud et al., Phys. Rev. F, 1(7):074103, 2016]. However, at length and time scales larger than the Debye…

Computational Physics · Physics 2019-04-10 Aleksandar Donev , Andrew J. Nonaka , Changho Kim , Alejandro L. Garcia , John B. Bell

In computational biochemistry and biophysics, understanding the role of electrostatic interactions is crucial for elucidating the structure, dynamics, and function of biomolecules. The Poisson-Boltzmann (PB) equation is a foundational tool…

Biomolecules · Quantitative Biology 2024-10-08 Yongxian Wu , Qiang Zhu , Ray Luo

Spectral methods are well suited for solving hydrodynamic problems in which the self-gravity of the flow needs to be considered. Because Poisson's equation is linear, the numerical solution for the gravitational potential for each…

Astrophysics · Physics 2008-11-26 Chi-kwan Chan , Dimitrios Psaltis , Feryal Ozel
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