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We study the effect of a non-Gaussian noise on interstate switching activated primarily by Gaussian noise. Even weak non-Gaussian noise can strongly change the switching rate. The effect is determined by all moments of the noise…

Statistical Mechanics · Physics 2009-11-13 Lora Billings , Mark I. Dykman , Ira B. Schwartz

The influence of noise on the generalized synchronization regime in the chaotic systems with dissipative coupling is considered. If attractors of the drive and response systems have an infinitely large basin of attraction, generalized…

Ordinary differential equation models are used to describe dynamic processes across biology. To perform likelihood-based parameter inference on these models, it is necessary to specify a statistical process representing the contribution of…

Noisy fluctuations are ubiquitous in complex systems. They play a crucial or delicate role in the dynamical evolution of gene regulation, signal transduction, biochemical reactions, among other systems. Therefore, it is essential to…

Dynamical Systems · Mathematics 2018-11-05 Jinqiao Duan , Hui Wang

We explore the use of non homogenous noise kernels in Gaussian process modelling to improve the potential energy curve models describing stochastic electronic structure data. We use the same noise kernels on energy curves describing…

Chemical Physics · Physics 2023-01-02 Fabio E. A. Albertani , Alex J. W. Thom

The benefit of sexual recombination is one of the most fundamental questions both in population genetics and evolutionary computation. It is widely believed that recombination helps solving difficult optimization problems. We present the…

Neural and Evolutionary Computing · Computer Science 2015-02-11 Tobias Friedrich , Timo Kötzing , Martin Krejca , Andrew M. Sutton

We study the flocking and pattern formations of active particles with a Vicsek-like model that includes a configuration dependent noise term. In particular, we couple the strength of the noise with both the local density and orientation of…

Biological Physics · Physics 2017-02-09 Kosuke Matsui , John J. Molina

It is well-known that gene activation/deactivation dynamics may be a major source of randomness in genetic networks, also in the case of large concentrations of the transcription factors. In this work, we investigate the effect of realistic…

Molecular Networks · Quantitative Biology 2014-10-28 Sebastiano de Franciscis , Giulio Caravagna , Alberto d'Onofrio

A model is proposed that describes the evolution of a mixed state of a quantum system for which gain and loss of energy or amplitude are present. Properties of the model are worked out in detail. In particular, invariant subspaces of the…

Quantum Physics · Physics 2012-12-06 Dorje C. Brody , Eva-Maria Graefe

The influence of contrarians on the noisy voter model is studied at the mean-field level. The noisy voter model is a variant of the voter model where agents can adopt two opinions, optimistic or pessimistic, and can change them by means of…

Physics and Society · Physics 2018-10-10 Nagi Khalil , Raul Toral

Summary statistics of the likelihood, such as the Bayesian evidence, offer a principled way of comparing models and assessing tension between, or within, the results of physical experiments. Noisy realisations of the data induce scatter in…

Cosmology and Nongalactic Astrophysics · Physics 2021-04-30 B. Joachimi , F. Köhlinger , W. Handley , P. Lemos

This paper introduces a new model of continuous opinion dynamics with random noise. The model belongs to the broad class of so called bounded confidence models. It differs from other popular bounded confidence models by the update rule,…

Adaptation and Self-Organizing Systems · Physics 2011-06-02 P. Nyczka

A system of coherently-driven two-level atoms is analyzed in presence of two independent stochastic perturbations: one due to collisions and a second one due to phase fluctuations of the driving field. The behaviour of the quantum…

Quantum Physics · Physics 2009-11-10 P. Adam , A. Karpati , W. Gawlik , J. Janszky

Variability on external conditions has important consequences for the dynamics and the organization of biological systems. In many cases, the characteristic timescale of environmental changes as well as their correlations play a fundamental…

Populations and Evolution · Quantitative Biology 2017-10-03 Tommaso Spanio , Jorge Hidalgo , Miguel A. Muñoz

We present a study of a phase-separation process induced by the presence of spatially-correlated multiplicative noise. We develop a mean-field approach suitable for conserved-order-parameter systems and use it to obtain the phase diagram of…

Condensed Matter · Physics 2009-10-31 M. Ibanes , J. Garcia-Ojalvo , R. Toral , J. M. Sancho

We study the effect of Gaussian perturbations on a class of model hyperbolic partial differential equations with double symplectic characteristics in low spatial dimensions, extending some recent work in [5]. The coefficients of our partial…

Probability · Mathematics 2024-09-04 Enrico Bernardi , Leonardo Marconi

We study the effects of time and space correlations of an external additive colored noise on the steady-state behavior of a Time-Dependent Ginzburg-Landau model. Simulations show the existence of nonequilibrium phase transitions controlled…

Condensed Matter · Physics 2009-10-22 Jordi Garcia-Ojalvo , Jose M. Sancho

We consider the dynamics of a population of organisms containing two mutually inhibitory gene regulatory networks, that can result in a bistable switch-like behaviour. We completely characterize their local and global dynamics in the…

Molecular Networks · Quantitative Biology 2016-10-07 Michael C. Mackey , Marta Tyran-Kaminska

Transcription factors perform facilitated diffusion (3D diffusion in the cytosol and 1D diffusion on the DNA) when binding to their target sites to regulate gene expression. Here, we investigated the influence of this binding mechanism on…

Molecular Networks · Quantitative Biology 2014-09-04 Armin P. Schoech , Nicolae Radu Zabet

The propagation of a state vector is governed by a set of time-invariant state transition matrices that switch arbitrarily between two values. The evolution of the state is also perturbed by white Gaussian noise with a variance that…

Dynamical Systems · Mathematics 2019-05-24 Yongeun Yoon , Corbin Klett , Eric Feron