Related papers: Modeling oscillatory Microtubule--Polymerization
The so-called Filament Based Lamellipodium Model is a complex modeling framework for a very heterogeneous chemo-mechanical system of cell biology. It contains a model for Coulomb repulsion between filaments, whose effect on the stability of…
We consider an ecological model consisting of two species of predators competing for their common prey with explicit interference competition. With a proper rescaling, the model is portrayed as a singularly perturbed system with one-fast…
Demixing of binary fluids subjected to slow temperature ramps shows repeated waves of nucleation which arise as a consequence of the competition between generation of supersaturation by the temperature ramp and relaxation of supersaturation…
We consider the model of fiber-laser cavities near the zero-dispersion point, based on the complex Ginzburg-Landau equation with the cubic-quintic nonlinearity, including the third-order dispersion (TOD) term. It is well known that this…
Complex dynamical systems may exhibit multiple steady states, including time-periodic limit cycles, where the final trajectory depends on initial conditions. With tuning of parameters, limit cycles can proliferate or merge at an exceptional…
Dual phospho/dephosphorylation cycles, as well as covalent enzymatic-catalyzed modifications of substrates, are widely diffused within cellular systems and are crucial for the control of complex responses such as learning, memory and…
We derive a necessary and sufficient condition for Turing instabilities to occur in two-component systems of reaction-diffusion equations with Neumann boundary conditions. We apply this condition to reaction-diffusion systems built from…
We investigate the effects of subsonic turbulence on a normal mode of oscillation [a possible origin of the high-frequency quasi-periodic oscillations (HFQPOs) within some black hole accretion disks]. We consider perturbations of a…
Biofilament-motor protein complexes are ubiquitous in biology and drive the transport of cargo vital for many fundamental cellular processes. As they move, motor proteins exert compressive forces on the filaments to which they are attached,…
In this paper, we analyze the stability, convergence, and bifurcation properties of the Boissonade-De Kepper (BD) model which played a key role in the development of nonlinear chemical dynamics. We first outline conditions for local…
We discuss the influence of periodic orbits on the dissociation of a model diatomic molecule driven by a strong bichromatic laser fields. Through the stability of periodic orbits we analyze the dissociation probability when parameters like…
Collision refers to a striking nonlinear interaction in dissipative systems, revealing the particle-like properties of solitons. In dual-wavelength mode-locked fiber lasers, collisions are inherent and periodic. However, how collisions…
On a two-dimensional circular domain, we analyze the formation of spatio-temporal patterns for a class of coupled bulk-surface reaction-diffusion models for which a passive diffusion process occurring in the interior bulk domain is linearly…
The influence of initial shape imperfections on the post-buckling and translational behavior of encapsulated microbubbles is investigated subject to acoustic excitation in an unbounded flow. Bifurcation analysis reveals that imperfections…
We examine examples of weakly nonlinear systems whose steady states undergo a bifurcation with increasing forcing, such that a forced subsystem abruptly ceases to absorb additional energy, instead diverting it into an initially quiescent,…
We consider a model proposed by one of the authors for a type of plastic instability found in creep experiments which reproduces a number of experimentally observed features. The model consists of three coupled non-linear differential…
In order to investigate the emergence of periodic oscillations of rimming flows, we study analytically the stability of steady states for the model of (Benilov, Kopteva, O'Brien, 2005), which describes the dynamics of a thin fluid film…
The amplitude equation of Gierer-Mainhardt model has been actually derived near the boundary abuot which Turing and Hopf modes exist. In a parameter region where Hopf-Turing mixed mode solution is stable, a chaotic state that generally…
Synchronization is an essential collective phenomenon in networks of interacting oscillators. Twisted states are rotating wave solutions in ring networks where the oscillator phases wrap around the circle in a linear fashion. Here, we…
We discuss how matrix-free/timestepper algorithms can efficiently be used with dynamic non-Newtonian fluid mechanics simulators in performing systematic stability/bifurcation analysis. The timestepper approach to bifurcation analysis of…