Related papers: The ideal trefoil knot

Kauffman knot polynomial invariants are discovered in classical abelian Chern-Simons field theory. A topological invariant $t^{I\left( \mathcal{L} \right) }$ is constructed for a link $\mathcal{L}$, where $I$ is the abelian Chern-Simons…

The primary objects of study in the ``knot theory of complex plane curves'' are C-links: links (or knots) cut out of a 3-sphere in the complex plane by complex plane transverse and totally tangential. Transverse C-links are naturally…

Using a combination of the replica-exchange Monte Carlo algorithm and the multicanonical method, we investigate the influence of bending stiffness on the conformational phases of a bead-stick homopolymer model and present the pseudo-phase…

Ozsvath and Szabo conjectured that knot Floer homology detects fibred knots. We propose a strategy to approach this conjecture based on Gabai's theory of sutured manifold decomposition and contact topology. We implement this strategy for…

We describe an approach to fix the gauge degrees of freedom in tensor networks, including those with closed loops, which allows a canonical form for arbitrary tensor networks to be realized. Additionally, a measure for the internal…

A knot is a circle piecewise-linearly embedded into the 3-sphere. The topology of a knot is intimately related to that of its exterior, which is the complement of an open regular neighborhood of the knot. Knots are typically encoded by…

The topological framework of circuit topology has recently been introduced to complement knot theory and to help in understanding the physics of molecular folding. Naturally evolved linear molecular chains, such as proteins and nucleic…

We give a criterion for an open book to contain an n-times iterated Hopf plumbing summand. As an application, we show that fibre surfaces of positive braid knots admit a trefoil plumbing structure.

We describe a procedure that creates an explicit complex-valued polynomial function of three-dimensional space, whose nodal lines are the three-twist knot $5_2$. The construction generalizes a similar approach for lemniscate knots: a braid…

The phenomenon of self-organization has been of special interest to the neural network community for decades. In this paper, we study a variant of the Self-Organizing Map (SOM) that models the phenomenon of self-organization of the…

A knot in a thickened surface $K$ is a smooth embedding $K:S^1 \rightarrow \Sigma \times [0,1]$, where $\Sigma$ is a closed, connected, orientable surface. There is a bijective correspondence between knots in $S^2 \times [0,1]$ and knots in…

This is a survey of knot contact homology, with an emphasis on topological, algebraic, and combinatorial aspects.

We present a 2D bosonization duality using the language of tensor networks. Specifically, we construct a tensor network operator (TNO) that implements an exact 2D bosonization duality. The primary benefit of the TNO is that it allows for…

We establish upper bounds for the complexity of Seifert fibered manifolds with nonempty boundary. In particular, we obtain potentially sharp bounds on the complexity of torus knot complements.

We consider complements of standard Seifert surfaces of special alternating links. On these handlebodies, we use Honda's method to enumerate those tight contact structures whose dividing sets are isotopic to the link, and find their number…

We consider the problem of an inextensible but flexible fiber advected by a steady chaotic flow, and ask the simple question whether the fiber can spontaneously knot itself. Using a 1D Cosserat model, a simple local viscous drag model and…

We generalize H. Seifert's algorithm for finding a Seifert surface for a knot or link. The generalization applies to "framed oriented measured lamination links." For knots, a Seifert surface determines a unique framing. In our setting, we…

We develop a skein exact sequence for knot Floer homology, involving singular knots. This leads to an explicit, algebraic description of knot Floer homology in terms of a braid projection of the knot.

Proper folding of deeply knotted proteins has a very low success rate even in structure-based models which favor formation of the native contacts but have no topological bias. By employing a structure-based model, we demonstrate that…

We construct solitons in affine orbifold nets associated with outer automorphisms, and we show that our construction gives all the twisted representations of the fixed point subnet. This allows us to settle a number of questions concerning…