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At what level does selective pressure effectively act? When considering the reproductive dynamics of interacting and mutating agents, it has long been debated whether selection is better understood by focusing on the individual or if…

Populations and Evolution · Quantitative Biology 2023-11-02 Hardik Rajpal , Clem von Stengel , Pedro A. M. Mediano , Fernando E. Rosas , Eduardo Viegas , Pablo A. Marquet , Henrik J. Jensen

The infrastructure upon which the functioning of society depends is composed of complex ecosystems of systems. Consequently, we must reason about the properties of such ecosystems, which requires that we construct models of them. There are…

Logic in Computer Science · Computer Science 2024-11-15 Didier Galmiche , Timo Lang , David Pym

Emergent behavior that appears at a given level of organization may be characterized as arising from an organizationally lower level in such a way that it transcends a mere increase in the behavioral degree of complexity. It is therefore to…

General Physics · Physics 2013-07-22 Gerald E. Marsh

In a complex system, the individual components are neither so tightly coupled or correlated that they can all be treated as a single unit, nor so uncorrelated that they can be approximated as independent entities. Instead, patterns of…

Populations and Evolution · Quantitative Biology 2015-09-15 Blake C. Stacey

Structural hierarchy, in which materials possess distinct features on multiple length scales, is ubiquitous in nature; diverse biological materials, such as bone, cellulose, and muscle, have as many as ten hierarchical levels. Structural…

Soft Condensed Matter · Physics 2019-06-19 Jonathan Michel , Peter Yunker

Thresholding--the pruning of nodes or edges based on their properties or weights--is an essential preprocessing tool for extracting interpretable structure from complex network data, yet existing methods face several key limitations.…

Social and Information Networks · Computer Science 2025-10-07 Adam Schroeder , Russell Funk , Jingyi Guan , Taylor Okonek , Lori Ziegelmeier

A central feature of complex systems is the relevance and entanglement of different levels of description. For instance, the dynamics of ecosystems can be alternatively described in terms of large ecological processes and classes of…

Populations and Evolution · Quantitative Biology 2025-10-06 Juan Giral Martínez , Silvia de Monte , Matthieu Barbier

Random matrix theory allows for the deduction of stability criteria for complex systems using only a summary knowledge of the statistics of the interactions between components. As such, results like the well-known elliptical law are…

Disordered Systems and Neural Networks · Physics 2023-11-06 Lyle Poley , Tobias Galla , Joseph W. Baron

We introduce a hierarchical classification of theories that describe systems with fundamentally limited information content. This property is introduced in an operational way and gives rise to the existence of mutually complementary…

Quantum Physics · Physics 2010-05-27 Tomasz Paterek , Borivoje Dakic , Caslav Brukner

The presence of hierarchy in many real-world networks is not yet fully explained. Complex interaction networks are often coarse-grain models of vast modular networks, where tightly connected subgraphs are agglomerated into nodes for…

Physics and Society · Physics 2021-02-24 C. Tyler Diggans , Jeremie Fish , Erik Bollt

Many of life's most fascinating phenomena emerge from interactions among many elements--many amino acids determine the structure of a single protein, many genes determine the fate of a cell, many neurons are involved in shaping our thoughts…

Quantitative Methods · Quantitative Biology 2011-11-28 Thierry Mora , William Bialek

In the paper we present results to develop an irreducible theory of complex systems in terms of self-organization processes of prime integer relations. Based on the integers and controlled by arithmetic only the self-organization processes…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Victor Korotkikh , Galina Korotkikh

Hierarchical structures are ubiquitous in human and animal societies, but a fundamental understanding of their raison d'\^etre has been lacking. Here, we present a general theory in which hierarchies are obtained as the optimal design that…

Physics and Society · Physics 2019-06-19 Sandro Claudio Lera , Didier Sornette

Stochastic processes offer a flexible mathematical formalism to model and reason about systems. Most analysis tools, however, start from the premises that models are fully specified, so that any parameters controlling the system's dynamics…

Systems and Control · Computer Science 2017-01-11 Luca Bortolussi , Guido Sanguinetti

Causal reasoning is essential for understanding decision-making about the behaviour of complex `ecosystems' of systems that underpin modern society, with security -- including issues around correctness, safety, resilience, etc. -- typically…

Logic in Computer Science · Computer Science 2025-08-05 Pinaki Chakraborty , Tristan Caulfield , David Pym

We show how biological grouping-particularly species formation-can emerge from interactions among populations governed by number-theoretic structure. In our framework, a species is identified with a $p$-Sylow subgroup of a community…

Populations and Evolution · Quantitative Biology 2026-03-17 Shun Adachi

In this paper we investigate phenomena of spontaneous emergence or purposeful formation of highly organized structures in networks of related agents. We show that the formation of large organized structures requires exponentially large, in…

Cryptography and Security · Computer Science 2023-04-11 V. Liagkou , P. E. Nastou , P. Spirakis , Y. C. Stamatiou

The stochastic scenario of relaxation in the complex systems is presented. It is based on a general probabilistic formalism of limit theorems. The nonexponential relaxation is shown to result from the asymptotic self-similar properties in…

Statistical Mechanics · Physics 2011-11-15 Aleksander Stanislavsky

Many algorithms for processing probabilistic networks are dependent on the topological properties of the problem's structure. Such algorithms (e.g., clustering, conditioning) are effective only if the problem has a sparse graph captured by…

Artificial Intelligence · Computer Science 2013-02-18 Yousri El Fattah , Rina Dechter

Human and artificial organizations may be described as networks of interacting parts. Those parts exchange data and control information and, as a result of these interactions, organizations produce emergent behaviors and purposes -- traits…

Computers and Society · Computer Science 2015-05-22 Vincenzo De Florio