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We consider the reconciliation problem, in which the task is to find a mapping of a gene tree into a species tree, so as to maximize the likelihood of such fitting, given the available data. We describe a model for the evolution of the…

Populations and Evolution · Quantitative Biology 2023-11-09 Albert C. Soewongsono , Jiahao Diao , Tristan Stark , Amanda E. Wilson , David A. Liberles , Barbara R. Holland , Malgorzata M. O'Reilly

Developing intuition about quantum information theory problems is difficult, as is verifying or ruling-out of hypothesis. We present a Matlab package intended to provide the QIT community with a new and powerful tool-set for quantum…

Quantum Physics · Physics 2007-08-06 Shai Machnes

Product search is generally recognized as the first and foremost stage of online shopping and thus significant for users and retailers of e-commerce. Most of the traditional retrieval methods use some similarity functions to match the…

Information Retrieval · Computer Science 2019-09-02 Jie Zou , Evangelos Kanoulas

We describe QWalk, a new computational package capable of performing Quantum Monte Carlo electronic structure calculations for molecules and solids with many electrons. We describe the structure of the program and its implementation of…

Computational Physics · Physics 2007-10-25 Lucas K. Wagner , Michal Bajdich , Lubos Mitas

In the foreseeable future, toolchains for quantum computing should offer automatic means of transforming a high level problem formulation down to a hardware executable form. Thereby, it is crucial to find (multiple) transformation paths…

Quantum Physics · Physics 2025-10-13 Lukas Schmidbauer , Wolfgang Mauerer

The method of choice to study one-dimensional strongly interacting many body quantum systems is based on matrix product states and operators. Such method allows to explore the most relevant, and numerically manageable, portion of an…

Statistical Mechanics · Physics 2018-10-10 Chu Guo , Zhanming Jie , Wei Lu , Dario Poletti

We present MultivariatePowerSeries, a Maple library introduced in Maple 2021, providing a variety of methods to study formal multivariate power series and univariate polynomials over such series. This library offers a simple and easy-to-use…

Symbolic Computation · Computer Science 2021-06-30 Mohammadali Asadi , Alexander Brandt , Mahsa Kazemi , Marc Moreno Maza , Erik Postma

We show how to construct relevant families of matrix product operators in one and higher dimensions. Those form the building blocks for the numerical simulation methods based on matrix product states and projected entangled pair states. In…

Quantum Physics · Physics 2010-05-04 V. Murg , J. I. Cirac , B. Pirvu , F. Verstraete

Any power series with unit constant term can be factored into an infinite product of the form $\prod_{n\geq 1} (1-q^n)^{-a_n}$. We give direct formulas for the exponents $a_n$ in terms of the coefficients of the power series, and vice…

Combinatorics · Mathematics 2025-08-19 Robert Schneider , Andrew V. Sills , Hunter Waldron

Quispel-Roberts-Thompson (QRT) maps are a family of birational maps of the plane which provide the simplest discrete analogue of an integrable Hamiltonian system, and are associated with elliptic fibrations in terms of biquadratic curves.…

Number Theory · Mathematics 2020-07-16 Andrew N. W. Hone

We present a simple proof of the factorization of (complex) symmetric matrices into a product of a square matrix and its transpose, and discuss its application in establishing a uniqueness property of certain antilinear operators.

Mathematical Physics · Physics 2007-05-23 Ali Mostafazadeh

Let $\mathbb{Q}$ (resp. $\mathbb{R}$) be the field of rational (resp. real) numbers and $X = (X_1, \ldots, X_n)$ be variables. Deciding the non-negativity of polynomials in $\mathbb{Q}[X]$ over $\mathbb{R}^n$ or over semi-algebraic domains…

Symbolic Computation · Computer Science 2018-05-08 Victor Magron , Mohab Safey El Din

We state and prove product formulae for several generating functions for sequences $(a_n)_{n\ge0}$ that are defined by the property that $Pa_n+b^2$ is a square, where $P$ and $b$ are given integers. In particular, we prove corresponding…

Number Theory · Mathematics 2021-11-30 Christian Krattenthaler , Mircea Merca , Cristian-Silviu Radu

We present two new algorithms for the computation of the q-integer linear decomposition of a multivariate polynomial. Such a decomposition is essential for the treatment of q-hypergeometric symbolic summation via creative telescoping and…

Symbolic Computation · Computer Science 2021-02-15 Mark Giesbrecht , Hui Huang , George Labahn , Eugene Zima

In many applications (hupergeometric-type) special functions like orthogonal polynomials are needed. For example in more than 50% of the published solutions for the (application-oriented) questions in the "Problems Section" of SIAM Review…

Classical Analysis and ODEs · Mathematics 2025-10-20 Wolfram Koepf

The natural Hilbert Space of quantum particles can implement maximum-likelihood (ML) decoding of classical information. The 'Quantum Product Algorithm' (QPA) is computed on a Factor Graph, where function nodes are unitary matrix operations…

Quantum Physics · Physics 2007-05-23 Matthew G. Parker

We have developed a Mathematica package capable of performing gamma-matrix algebra in arbitrary (integer) dimensions. As an application we can compute Fierz transformations.

High Energy Physics - Theory · Physics 2007-05-23 Ulf Gran

We provide a framework for relating certain q-series defined by sums over partitions to multiple zeta values. In particular, we introduce a space of polynomial functions on partitions for which the associated q-series are q-analogues of…

Number Theory · Mathematics 2023-08-22 Henrik Bachmann , Jan-Willem van Ittersum

We study finite-dimensional representations of quantum affine algebras using q-characters. We prove the conjectures from math.QA/9810055 and derive some of their corollaries. In particular, we prove that the tensor product of fundamental…

Quantum Algebra · Mathematics 2009-10-31 Edward Frenkel , Evgeny Mukhin

We present the Mathematica package QMeS-Derivation. It derives symbolic functional equations from a given master equation. The latter include functional renormalisation group equations, Dyson-Schwinger equations, Slavnov-Taylor and Ward…

High Energy Physics - Phenomenology · Physics 2022-02-09 Jan M. Pawlowski , Coralie S. Schneider , Nicolas Wink