Related papers: Algorithms for recognizing knots and 3-manifolds
We define a Floer-homology invariant for knots in an oriented three-manifold, closely related to the holomorphic disk Floer homologies for three-manifolds defined in an earlier paper. We set up basic properties of these invariants,…
This is a survey of known algorithms in algebraic topology with a focus on finite simplicial complexes and, in particular, simplicial manifolds. Wherever possible an elementary approach is chosen. This way the text may also serve as a…
Given a $3$-manifold $M$ with multiple incompressible torus boundary components, we develop a general definition of order-detection of tuples of slopes on the boundary components of $M$. In parallel, we arrive at a general definition of…
Supervised machine learning (ML) methods are emerging as valid alternatives to standard mathematical methods for identifying knots in long, collapsed polymers. Here, we introduce a hybrid supervised/unsupervised ML approach for knot…
The manifold hypothesis, which assumes that data lies on or close to an unknown manifold of low intrinsic dimension, is a staple of modern machine learning research. However, recent work has shown that real-world data exhibits distinct…
In this paper, we design linear time algorithms to recognize and determine topological invariants such as the genus and homology groups in 3D. These properties can be used to identify patterns in 3D image recognition. This has tremendous…
We present a computational approach for unfolding 3D shapes isometrically into the plane as a single patch without overlapping triangles. This is a hard, sometimes impossible, problem, which existing methods are forced to soften by allowing…
We use technology from sutured manifold theory and the theory of Heegaard splittings to relate genus reducing crossing changes on knots in S^3 to twists on surfaces arising in circular Heegaard splittings for knot complements. In a separate…
In this article, we re-introduce the so called "Arkaden-Faden-Lage" (AFL for short) representation of knots in 3 dimensional space introduced by Kurt Reidemeister and show how it can be used to develop efficient algorithms to compute some…
Plotting solution sets for particular equations may be complicated by the existence of turning points. Here we describe an algorithm which not only overcomes such problematic points, but does so in the most general of settings. Applications…
We present a new paradigm for three dimensional chaos, and specifically for the Lorenz equations. The main difficulty in these equations and for a generic flow in dimension three is the existence of singularities. We show how to use knot…
Higher-order graph neural networks (HOGNNs) and the related architectures from Topological Deep Learning are an important class of GNN models that harness polyadic relations between vertices beyond plain edges. They have been used to…
The deep connection among braids, knots and topological physics has provided valuable insights into studying topological states in various physical systems. However, identifying distinct braid groups and knot topology embedded in…
We extend the entanglement bootstrap approach to (3+1)-dimensions. We study knotted excitations of (3+1)-dimensional liquid topological orders and exotic fusion processes of loops. As in previous work in (2+1)-dimensions, we define a…
Detecting 3D keypoints from point clouds is important for shape reconstruction, while this work investigates the dual question: can shape reconstruction benefit 3D keypoint detection? Existing methods either seek salient features according…
We discuss an "extrinsic" property of knots in a 3-subspace of the 3-sphere $S^3$ to characterize how the subspace is embedded in $S^3$. Specifically, we show that every knot in a subspace of the 3-sphere is transient if and only if the…
We study the large-scale geometry of 3-manifolds with nontrivial 2-dimensional bounded cohomology, with a view to proving a weak version of the geometrization conjecture for such manifolds.
The space of n-sided polygons embedded in three-space consists of a smooth manifold in which points correspond to piecewise linear or ``geometric'' knots, while paths correspond to isotopies which preserve the geometric structure of these…
Non-isotopic Heegaard splittings of non-minimal genus were known previously only for very special 3-manifolds. We show in this paper that they are in fact a wide spread phenomenon in 3-manifold theory: We exhibit a large class of knots and…
We propose a new method of computing cohomology groups of spaces of knots in $\R^n$, $n \ge 3$, based on the topology of configuration spaces and two-connected graphs, and calculate all such classes of order $\le 3.$ As a byproduct we…