Related papers: Geometry of the Kimura 3-parameter model
In the last years, algebraic tools have been proven useful in phylogenetic reconstruction and model selection through the study of phylogenetic invariants. However, up to now, the models studied from an algebraic viewpoint are either too…
Phylogenetic (i.e. leaf-labeled) trees play a fundamental role in evolutionary research. A typical problem is to reconstruct such trees from data like DNA alignments (whose columns are often referred to as characters), and a simple…
The Computational Algebraic Geometry applied in Algebraic Statistics; are beginning to exploring new branches and applications; in artificial intelligence and others areas. Currently, the development of the mathematics is very extensive and…
For a model of molecular evolution to be useful for phylogenetic inference, the topology of evolutionary trees must be identifiable. That is, from a joint distribution the model predicts, it must be possible to recover the tree parameter.…
We show that there is a good notion of irreducible sympelectic varieties of $\mathrm{K3}^{[n]}$-type over an arbitrary field of characteristic zero or $p > n + 1$. Then we construct mixed characteristic moduli spaces for these varieties.…
We discuss the local differential geometry of convex affine spheres in $\re^3$ and of minimal Lagrangian surfaces in Hermitian symmetric spaces. In each case, there is a natural metric and cubic differential holomorphic with respect to the…
Algebraic varieties are the geometric shapes defined by systems of polynomial equations; they are ubiquitous across mathematics and science. Amongst these algebraic varieties are Q-Fano varieties: positively curved shapes which have…
We introduce the notion of a manifold admitting a simple compact Cartan 3-form $\om^3$. We study algebraic types of such manifolds specializing on those having skew-symmetric torsion, or those associated with a closed or coclosed 3-form…
Buczy\'{n}ska and Wi\'{s}niewski showed that for the Jukes Cantor binary model of a 3-valent tree the Hilbert polynomial depends only on the number of leaves of the tree and not on its shape. We ask if this can be generalized to other…
In this paper, we prove that the self-dual morphological hierarchical structure computed on a n-D gray-level wellcomposed image u by the algorithm of G{\'e}raud et al. [1] is exactly the mathematical structure defined to be the tree of…
In recent decades, linear affine threefolds have enabled researchers to solve some of the challenging problems on affine spaces. Koras-Russell threefolds, especially the Russell Cubic over $\mathbb{C}$ and Asanuma threefolds over a field of…
In this study, we construct four-dimensional F-theory models with 3 to 8 U(1) factors on products of K3 surfaces. We provide explicit Weierstrass equations of elliptic K3 surfaces with Mordell-Weil ranks of 3 to 8. We utilize the method of…
Almost toric manifolds form a class of singular Lagrangian fibered symplectic manifolds that is a natural generalization of toric manifolds. Notable examples include the K3 surface, the phase space of the spherical pendulum and rational…
The fundamental theorem of affine geometry is a classical and useful result. For finite-dimensional real vector spaces, the theorem roughly states that a bijective self-mapping which maps lines to lines is affine. In this note we prove…
Phylogenetic models have polynomial parametrization maps. For symmetric group-based models, Matsen studied the polynomial inequalities that characterize the joint probabilities in the image of these parametrizations. We employ this…
In this paper we study the general affine differential geometry of surfaces in affine space $A^3$. For a regular elliptical surface we define a moving frame of minimal order and get the complete system of differential invariants. As an…
Given a compact complex manifold X of dimension n, we define a bimeromorphic invariant $\kappa_+(X)$ as the maximum p for which there is a saturated line subsheaf L of the sheaf of holomorphic p forms whose Kodaira dimension $\kappa (L)$…
In this note, we initiate a study of the finite-dimensional representation theory of a class of algebras that correspond to noncommutative deformations of compact surfaces of arbitrary genus. Low dimensional representations are investigated…
In this work, we construct some irreducible components of the space of two-dimensional holomorphic foliations on $\mathbb{P}^n$ associated to some algebraic representations of the affine Lie algebra $\mathfrak{aff}(\mathbb{C})$. We give a…
Double planes branched in 6 lines give a famous example of K3 surfaces. Their moduli are well understood and related to abelian fourfolds of Weil type. We compare these two moduli interpretations and in particular divisors on the moduli…