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The biologist Ren\'e Thomas conjectured, twenty years ago, that the presence of a negative feedback circuit in the interaction graph of a dynamical system is a necessary condition for this system to produce sustained oscillations. In this…

Discrete Mathematics · Computer Science 2009-07-30 Adrien Richard

Synchronization of coupled continuous-time linear systems is studied in a general setting. For identical neutrally-stable linear systems that are detectable from their outputs, it is shown that a linear output feedback law exists under…

Optimization and Control · Mathematics 2008-01-22 S. Emre Tuna

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

Combinatorics · Mathematics 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher

The interplay of positive and negative feedback loops on different time scales appears to be a fundamental mechanisms for robust and tunable oscillations in both biological systems and electro-mechanical systems. We develop a detailed…

Systems and Control · Electrical Eng. & Systems 2021-04-06 Weiming Che , Fulvio Forni

Deterministic and stochastic Boolean network models are build for the dynamics of negative feedback loops of the p53 pathways. It is shown that the main function of the negative feedback in the p53 pathways is to keep p53 at a low steady…

Molecular Networks · Quantitative Biology 2009-04-16 Hao Ge , Min Qian

For most stochastic dynamical systems, variables which are tightly regulated tend to respond slowly to external changes. This idea is often discussed for applicable systems, within a linear response regime, through the Fluctuation…

General Physics · Physics 2017-11-15 Nash Rochman , Sean X. Sun

Biological systems rely on robust internal information processing: Survival depends on highly reproducible dynamics of regulatory processes. Biological information processing elements, however, are intrinsically noisy (genetic switches,…

Molecular Networks · Quantitative Biology 2009-11-10 Konstantin Klemm , Stefan Bornholdt

We study classes of dynamical systems that can be obtained by constructing recursive networks with monotone Boolean functions. Stack filters in nonlinear signal processing are special cases of such systems. We show an analytical connection…

Disordered Systems and Neural Networks · Physics 2009-07-28 Matti Nykter , Juha Kesseli , Ilya Shmulevich

This article is devoted to a description of the dynamics of the phase flow of monotone contact Hamiltonian systems. Particular attention is paid to locating the maximal attractor (or repeller), which could be seen as the union of compact…

Dynamical Systems · Mathematics 2021-07-07 Liang Jin , Jun Yan

For the discrete-time dynamical system generated by the Poincare map T of a time-periodic closed-loop negative feedback system, we present an amenable condition which enables us to obtain the global convergence of the orbits. This yields…

Dynamical Systems · Mathematics 2025-01-03 Yi Wang , Wenji Wu , Hui Zhou

Feedback loops are essential for regulating cell proliferation and maintaining the delicate balance between cell division and cell death. Thanks to the exact solution of a few simple models of cell growth it is by now clear that stochastic…

Populations and Evolution · Quantitative Biology 2023-03-07 Antonio Francesco Zirattu , Marta Biondo , Matteo Osella , Michele Caselle

Highly nonlinear behavior of a system of discrete sites on a lattice is observed when a specific feedback loop is introduced into models employing coupled map lattices, quantum cellular automata, or the real-valued analogues of the latter.…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Siegfried Fussy , Gerhard Groessing , Herbert Schwabl

This paper presents an algorithm for approximating certain types of dynamical systems given by a system of ordinary delay differential equations by a Boolean network model. Often Boolean models are much simpler to understand than complex…

Molecular Networks · Quantitative Biology 2011-05-10 Franziska Hinkelmann , Reinhard Laubenbacher

Tumor metastasis is one of the main factors responsible for the high fatality rate of cancer. Metastasis can occur after malignant cells transition from the epithelial phenotype to the mesenchymal phenotype. This transformation allows cells…

Molecular Networks · Quantitative Biology 2020-05-15 M. Ali Al-Radhawi , Eduardo D. Sontag

This note remarks that small-gain results for a negative feedback loop around a monotone system can be seen as consequences of results concerning an extended monotone system.

Optimization and Control · Mathematics 2007-05-23 Eduardo D. Sontag

Networked dynamical systems, i.e., systems of dynamical units coupled via nontrivial interaction topologies, constitute models of broad classes of complex systems, ranging from gene regulatory and metabolic circuits in our cells to…

Adaptation and Self-Organizing Systems · Physics 2024-03-12 Xiaozhu Zhang , Marc Timme

We study the well-posedness and stability of an impedance passive infinite-dimensional linear system under nonlinear feedback of the form $u(t)=\phi(v(t)-y(t))$, where $\phi$ is a monotone function. Our first main result introduces…

Optimization and Control · Mathematics 2025-06-19 Anthony Hastir , Lassi Paunonen

For a class of $(N+1)$-dimensional systems of differential delay equations with a cyclic and monotone negative feedback structure, we construct a two-dimensional invariant manifold, on which phase curves spiral outward towards a bounding…

Dynamical Systems · Mathematics 2025-04-01 Anatoli F. Ivanov , Bernhard Lani-Wayda

Monotone systems comprise an important class of dynamical systems that are of interest both for their wide applicability and because of their interesting mathematical properties. It is known that under the property of quasimonotonicity…

Dynamical Systems · Mathematics 2015-05-20 Eoin Devane , Ioannis Lestas

We analyze a class of network motifs in which a short, two-node positive feed- back motif is inserted in a three-node negative feedback loop. We demonstrate that such networks can undergo a bifurcation to a state where a stable fixed point…

Molecular Networks · Quantitative Biology 2012-09-10 Weihan Li , Sandeep Krishna , Simone Pigolotti , Namiko Mitarai , Mogens H. Jensen