Related papers: Toric geometry of cuts and splits

Relying on the combinatorial classification of toric ideals using their bouquet structure, we focus on toric ideals of hypergraphs and study how they relate to general toric ideals. We show that hypergraphs exhibit a surprisingly general…

Let $G$ be a simple graph on the vertex set $\{v_{1},\ldots,v_{n}\}$. An algebraic object attached to $G$ is the toric ideal $I_G$. We say that $I_G$ is subgraph splittable if there exist subgraphs $G_1$ and $G_2$ of $G$ such that…

Toric geometry provides a bridge between the theory of polytopes and algebraic geometry: one can associate to each lattice polytope a polarized toric variety. In this thesis we explore this correspondence to classify smooth lattice…

Our purpose is to study the family of simple undirected graphs whose toric ideal is a complete intersection from both an algorithmic and a combinatorial point of view. We obtain a polynomial time algorithm that, given a graph $G$, checks…

In this paper we define and study a ring associated to a graph that we call the cographic toric face ring, or simply the cographic ring. The cographic ring is the toric face ring defined by the following equivalent combinatorial structures…

We characterize the graphs $G$ for which their toric ideals $I_G$ are complete intersections. In particular we prove that for a connected graph $G$ such that $I_G$ is complete intersection all of its blocks are bipartite except of at most…

Let $I_G$ be the toric ideal of a graph $G$. We characterize in graph theoretical terms the primitive, the minimal, the indispensable and the fundamental binomials of the toric ideal $I_G$.

A toric cube is a subset of the standard cube defined by binomial inequalities. These basic semialgebraic sets are precisely the images of standard cubes under monomial maps. We study toric cubes from the perspective of topological…

We apply some basic notions from combinatorial topology to establish various algebraic properties of edge ideals of graphs and more general Stanley-Reisner rings. In this way we provide new short proofs of some theorems from the literature…

In this paper we study a construction of algebraic curves from combinatorial data. In the study of algebraic curves through degeneration, graphs usually appear as the dual intersection graph of the central fiber. Properties of such graphs…

Toric codes are obtained by evaluating rational functions of a nonsingular toric variety at the algebraic torus. One can extend toric codes to the so called generalized toric codes. This extension consists on evaluating elements of an…

In this article, we introduce a relation including ideals of an evolution algebra and hereditary subsets of vertices of its associated graph and establish some properties among them. This relation allows us to determine maximal ideals and…

Statistical models of evolution are algebraic varieties in the space of joint probability distributions on the leaf colorations of a phylogenetic tree. The phylogenetic invariants of a model are the polynomials which vanish on the variety.…

Toric geometry provides a bridge between algebraic geometry and combinatorics of fans and polytopes. For each polarized toric variety (X,L) we have associated a polytope P. In this thesis we use this correspondence to study birational…

The construction of joins and secant varieties is studied in the combinatorial context of monomial ideals. For ideals generated by quadratic monomials, the generators of the secant ideals are obstructions to graph colorings, and this leads…

Characteristic imsets are 0-1 vectors which correspond to Markov equivalence classes of directed acyclic graphs. The study of their convex hull, named the characteristic imset polytope, has led to new and interesting geometric perspectives…

Tropical algebraic geometry offers new tools for elimination theory and implicitization. We determine the tropicalization of the image of a subvariety of an algebraic torus under any homomorphism from that torus to another torus.

The geometric vertex decomposability property for polynomial ideals is an ideal-theoretic generalization of the vertex decomposability property for simplicial complexes. Indeed, a homogeneous geometrically vertex decomposable ideal is…

Let $G$ be a finite graph allowing loops, having no multiple edge and no isolated vertex. We associate $G$ with the edge polytope ${\cal P}_G$ and the toric ideal $I_G$. By classifying graphs whose edge polytope is simple, it is proved that…

This is a survey article written for the Jahresberichte der DMV. Tropical geometry can be viewed as an efficient combinatorial tool to study degenerations in algebraic geometry. Abstract tropical curves are essentially metric graphs, and…