Related papers: Noncrossing Trees and Noncrossing Graphs
Mandelbrot and Frame studied the geometry of self-contracting symmetric binary trees in which they stated that the height of such trees occurred at the branch tip of the path consisting of branches that alternate left and right. Taylor…
We investigate the parameterized complexity of the recognition problem for the proper $H$-graphs. The $H$-graphs are the intersection graphs of connected subgraphs of a subdivision of a multigraph $H$, and the properness means that the…
A binary tanglegram is a pair <S,T> of binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example in phylogenetics or software engineering, it is required…
Edge crossings in geometric graphs are sometimes undesirable as they could lead to unwanted situations such as collisions in motion planning and inconsistency in VLSI layout. Short geometric structures such as shortest perfect matchings,…
Rooted phylogenetic networks are used to describe evolutionary histories that contain non-treelike evolutionary events such as hybridization and horizontal gene transfer. In some cases, such histories can be described by a phylogenetic…
I present an algorithm that, given a number $n \geq 1$, computes a compact representation of the set of all noncrossing acyclic digraphs with $n$ nodes. This compact representation can be used as the basis for a wide range of dynamic…
The operation of transforming one spanning tree into another by replacing an edge has been considered widely, both for general and planar straight-line graphs. For the latter, several variants have been studied (e.g., edge slides and edge…
The classical matrix tree theorem relates the number of spanning trees of a connected graph with the product of the nonzero eigenvalues of its Laplacian matrix. The class of regular matroids generalizes that of graphical matroids, and a…
We introduce polytopal cell complexes associated with partial acyclic orientations of a simple graph, which generalize acyclic orientations. Using the theory of cellular resolutions, two of these polytopal cell complexes are observed to…
The notion of noncrossing linked partition arose from the study of certain transforms in free probability theory. It is known that the number of noncrossing linked partitions of [n+1] is equal to the n-th large Schroder number $r_n$, which…
This paper investigates two involutions on binary trees. One is the mirror symmetry of binary trees which combined with the classical bijection $\varphi$ between binary trees and plane trees answers an open problem posed by Bai and Chen.…
In this paper we examine the classes of graphs whose $K_n$-complements are trees and quasi-threshold graphs and derive formulas for their number of spanning trees; for a subgraph $H$ of $K_n$, the $K_n$-complement of $H$ is the graph…
We consider questions related to the existence of spanning trees in graphs with the property that after the removal of any path in the tree the graph remains connected. We show that, for planar graphs, the existence of trees with this…
Message passing equations yield a sharp percolation transition in finite graphs, as an artifact of the locally treelike approximation. For an arbitrary finite, connected, undirected graph we construct an infinite tree having the same local…
Counting non-isomorphic tree-like multigraphs that include self-loops and multiple edges is an important problem in combinatorial enumeration, with applications in chemical graph theory, polymer science, and network modeling. Traditional…
We introduce the concept of matching connectivity as a notion of connectivity in graph admitting perfect matchings which heavily relies on the structural properties of those matchings. We generalise a result of Robertson, Seymour and Thomas…
Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…
A subgraph $H$ of an edge-colored graph $G$ is rainbow if all the edges of $H$ receive different colors. If $G$ does not contain a rainbow subgraph isomorphic to $H$, we say that $G$ is rainbow $H$-free. For connected graphs $H_1$ and…
We consider the problem of uniformly generating a spanning tree, of a connected undirected graph. This process is useful to compute statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle…
Given a tree and a set ${\cal P}$ of non-trivial simple paths on it, $VPT({\cal P})$ is the VPT graph (i.e. the vertex intersection graph) of the paths ${\cal P}$ of the tree $T$, and $EPT({\cal P})$ is the EPT graph (i.e. the edge…