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Considerable attention has been paid, in recent years, to the use of networks in modeling complex real-world systems. Among the many dynamical processes involving networks, propagation processes -- in which final state can be obtained by…

Populations and Evolution · Quantitative Biology 2017-10-06 Antoine Allard , Pierre-André Noël , Louis J. Dubé , Babak Pourbohloul

Two crucial elements facilitate the understanding and control of communicable disease spread within a social setting. These components are, the underlying contact structure among individuals that determines the pattern of disease…

Populations and Evolution · Quantitative Biology 2013-05-29 Pierre-Andre Noel , Bahman Davoudi , Louis J. Dube , Robert C. Brunham , Babak Pourbohloul

We consider a dynamical process on a graph $G$, in which vertices are infected (randomly) at a rate which depends on the number of their neighbours that are already infected. This model includes bootstrap percolation and first-passage…

Probability · Mathematics 2018-05-18 Béla Bollobás , Simon Griffiths , Robert Morris , Leonardo Rolla , Paul Smith

We propose a simple model for mass transport within a fungal hypha and its subsequent growth. Inspired by the role of microtubule-transported vesicles, we embody the internal dynamics of mass inside a hypha with mutually excluding particles…

Subcellular Processes · Quantitative Biology 2007-05-23 K. E. P. Sugden , M. R. Evans , W. C. K. Poon , N. D. Read

We consider first passage percolation (FPP) on T_d x Z, where T_d is the d-regular tree (d>=3). It is shown that for a fixed vertex v in the tree, the fluctuation of the distance in the FPP metric between the points (v,0) and (v,n) is of…

Probability · Mathematics 2018-06-20 Itai Benjamini , Pascal Maillard

Human diseases spread over networks of contacts between individuals and a substantial body of recent research has focused on the dynamics of the spreading process. Here we examine a model of two competing diseases spreading over the same…

Physics and Society · Physics 2015-03-19 Brian Karrer , M. E. J. Newman

We investigate a novel first-passage percolation model, referred to as the Brochette first-passage percolation model, where the passage times associated with edges lying on the same line are equal. First, we establish a point-to-point…

Probability · Mathematics 2026-04-15 Maxime Marivain

Recent studies of cooled oil emulsion droplets uncovered transformations into a host of flattened shapes with straight edges and sharp corners, driven by a partial phase transition of the bulk liquid phase. Here, we explore theoretically…

Soft Condensed Matter · Physics 2017-03-01 Pierre A. Haas , Raymond E. Goldstein , Stoyan K. Smoukov , Diana Cholakova , Nikolai Denkov

From bird flocks and fish schools to migrating cell sheets, collective motion is a ubiquitous biological phenomenon that inspires quantitative modeling through self-propelled particle (SPP) frameworks. Conventional SPP models prescribe…

Statistical Mechanics · Physics 2025-07-15 Y. Kikuchi , M. Iwamoto

Understanding which phenotypic traits are consistently correlated throughout evolution is a highly pertinent problem in modern evolutionary biology. Here, we propose a multivariate phylogenetic latent liability model for assessing the…

Populations and Evolution · Quantitative Biology 2015-09-17 Gabriela B. Cybis , Janet S. Sinsheimer , Trevor Bedford , Alison E. Mather , Philippe Lemey , Marc A. Suchard

We consider the following interacting particle system: There is a ``gas'' of particles, each of which performs a continuous time simple random walk on the d-dimensional lattice. These particles are called A-particles and move independently…

Probability · Mathematics 2007-05-23 Harry Kesten , Vladas Sidoravicius

We consider two competing first passage percolation processes started from uniformly chosen subsets of a random regular graph on $N$ vertices. The processes are allowed to spread with different rates, start from vertex subsets of different…

Probability · Mathematics 2014-08-05 Tonći Antunović , Yael Dekel , Elchanan Mossel , Yuval Peres

We study a generalization of the two colors multitype contact process intended to mimic an example of interspecific competition called allelopathy.

Probability · Mathematics 2007-05-23 Nicolas Lanchier

In this short note, we construct a class of models of an extension of homotopy type theory, which we call homotopy type theory with an interval type.

Logic in Computer Science · Computer Science 2020-07-15 Valery Isaev

We prove $\sqrt{\log n}$ lower bounds on the order of growth fluctuations in three planar growth models (first-passage percolation, last-passage percolation, and directed polymers) under no assumptions on the distribution of vertex or edge…

Probability · Mathematics 2021-08-30 Erik Bates , Sourav Chatterjee

A competition process on $\mathbb{Z}^d$ is considered, where two species compete to color the sites. The entities are driven by branching random walks. Specifically red (blue) particles reproduce in discrete time and place offspring…

Probability · Mathematics 2022-03-29 Maria Deijfen , Timo Vilkas

Epidemiological data on seasonal influenza show that the growth rate of the number of infected individuals can increase passing from one exponential growth rate to another one with a larger exponent. Such behavior is not described by…

Populations and Evolution · Quantitative Biology 2020-04-01 Malay Banerjee , Alexey Tokarev , Vitaly Volpert

There exist two known canonical types of ultrafilter extensions of first-order models; one comes from modal logic and universal algebra, another one from model theory and algebra of ultrafilters, with ultrafilter extensions of semigroups as…

Logic · Mathematics 2021-06-17 Nikolai L. Poliakov , Denis I. Saveliev

We introduce a general theoretical framework to study the shape dynamics of actively growing and remodeling surfaces. Using this framework we develop a physical model for growing bacterial cell walls and study the interplay of cell shape…

Biological Physics · Physics 2016-04-08 Shiladitya Banerjee , Norbert F. Scherer , Aaron R. Dinner

We systematize and extend the description of vesicle growth and shape change using linear nonequilibrium thermodynamics. By restricting the study to shape changes from spheres to axisymmetric ellipsoids, we are able to give a consistent…

Soft Condensed Matter · Physics 2015-05-20 Richard G. Morris , Duccio Fanelli , Alan J. McKane
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