Related papers: Three-page encoding and complexity theory for spat…
A combinatorial model of molecular conformational space that was previously developped (J. Gabarro-Arpa, Comp. Biol. and Chem. 27, (2003) 153-159), had the drawback that structures could not be properly embedded beacause it lacked explicit…
We consider the problem of embedding the nodes of a hypergraph into Euclidean space under the assumption that the interactions arose through closeness to unknown hyperedge centres. In this way, we tackle the inverse problem associated with…
The aim of this paper is to generalize the notion of the coloring complex of a graph to hypergraphs. We present three different interpretations of those complexes -- a purely combinatorial one and two geometric ones. It is shown, that most…
An embedding of a graph in a book, called book embedding, consists of a linear ordering of its vertices along the spine of the book and an assignment of its edges to the pages of the book, so that no two edges on the same page cross. The…
Deciding whether a graph can be embedded in a grid using only unit-length edges is NP-complete, even when restricted to binary trees. However, it is not difficult to devise a number of graph classes for which the problem is polynomial, even…
Intrinsic computation refers to how dynamical systems store, structure, and transform historical and spatial information. By graphing a measure of structural complexity against a measure of randomness, complexity-entropy diagrams display…
A graph covering projection, also referred to as a locally bijective homomorphism, is a mapping between the vertices and edges of two graphs that preserves incidences and is a local bijection. This concept originates in topological graph…
This work studies certain aspects of graphs embedded on surfaces. Initially, a colored graph model for a map of a graph on a surface is developed. Then, a concept analogous to (and extending) planar graph is introduced in the same spirit as…
Knowledge is captured in the form of entities and their relationships and stored in knowledge graphs. Knowledge graphs enhance the capabilities of applications in many different areas including Web search, recommendation, and natural…
We announce results about flat (linkless) embeddings of graphs in 3-space. A piecewise-linear embedding of a graph in 3-space is called {\it flat} if every circuit of the graph bounds a disk disjoint from the rest of the graph. We have…
Abstract notions of convexity over the vertices of a graph, and corresponding notions of halfspaces, have recently gained attention from the machine learning community. In this work we study monophonic halfspaces, a notion of graph…
In the present paper, we propose a new discrete surface theory on 3-valent embedded graphs in the 3-dimensional Euclidean space which are not necessarily discretization or approximation of smooth surfaces. The Gauss curvature and the mean…
We show that the complete graphs on $24s+21$ vertices have decompositions into two edge-disjoint subgraphs, each of which triangulates an orientable surface. The special case where the two surfaces are homeomorphic solves a generalized…
A book embedding of a graph consists of an embedding of its vertices along the spine of a book, and an embedding of its edges on the pages such that edges embedded on the same page do not intersect. The pagenumber is the minimum number of…
Entangled embedded periodic nets and crystal frameworks are defined, along with their dimension type, homogeneity type, adjacency depth and periodic isotopy type. We obtain periodic isotopy classifications for various families of embedded…
Embedding graph nodes into a vector space can allow the use of machine learning to e.g. predict node classes, but the study of node embedding algorithms is immature compared to the natural language processing field because of a diverse…
We present a bijection between some quadrangular dissections of an hexagon and unrooted binary trees, with interesting consequences for enumeration, mesh compression and graph sampling. Our bijection yields an efficient uniform random…
The development of the theory of three-dimensional harmonic mappings is considered. The new classes of mappings that generate three-dimensional harmonic functions are introduced. The physical interpretation of these mappings is applied to…
In this article, we establish a mathematical framework that utilizes concepts from graph theory to formalize the parity transformation, an encoding strategy for compiling optimization problems on quantum devices. We introduce the…
We show that planar embeddable 3-connected CAD graphs are generically non-soluble. A CAD graph represents a configuration of points on the Euclidean plane with just enough distance dimensions between them to ensure rigidity. Formally, a CAD…