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Multi-relational graph is a ubiquitous and important data structure, allowing flexible representation of multiple types of interactions and relations between entities. Similar to other graph-structured data, link prediction is one of the…

Following the approach to grid homology of links in $S^3$, we prove combinatorially that the grid homology of links in lens spaces defined by Baker, Grigsby, and Hedden is a link invariant. Further, using the sign assignment defined by…

Geometric Topology · Mathematics 2021-10-05 Samuel Tripp

A multigraph is a nonsimple graph which is permitted to have multiple edges, that is, edges that have the same end nodes. We introduce the concept of spanning simplicial complexes $\Delta_s(\mathcal{G})$ of multigraphs $\mathcal{G}$, which…

Algebraic Topology · Mathematics 2017-08-22 Imran Ahmed , Shahid Muhmood

Multipath cohomology is a cohomology theory for directed graphs, which is defined using the path poset. The aim of this paper is to investigate combinatorial properties of path posets, and to provide computational tools for multipath…

Combinatorics · Mathematics 2023-08-17 Luigi Caputi , Carlo Collari , Sabino Di Trani

We use Khovanov-Rozansky gl(N) link homology to define invariants of oriented smooth 4-manifolds, as skein modules constructed from certain 4-categories with well-behaved duals. The technical heart of this construction is a proof of the…

Quantum Algebra · Mathematics 2023-03-24 Scott Morrison , Kevin Walker , Paul Wedrich

In their recent preprint, Baldwin, Ozsv\'{a}th and Szab\'{o} defined a twisted version (with coefficients in a Novikov ring) of a spectral sequence, previously defined by Ozsv\'{a}th and Szab\'{o}, from Khovanov homology to Heegaard-Floer…

Geometric Topology · Mathematics 2014-02-06 Daniel Kriz , Igor Kriz

A knot is a circle piecewise-linearly embedded into the 3-sphere. The topology of a knot is intimately related to that of its exterior, which is the complement of an open regular neighborhood of the knot. Knots are typically encoded by…

Geometric Topology · Mathematics 2023-03-20 Nathan M. Dunfield , Malik Obeidin , Cameron Gates Rudd

Let $\Delta$ be a trivial knot in the three-sphere. For every finite cyclic group $G$ of odd order, we construct a $G$-equivariant Khovanov homology with coefficients in the filed $\F_{2}$. This homology is an invariant of links up to…

Geometric Topology · Mathematics 2007-05-23 Nafaa Chbili

Let $\mathcal{G}$ be the set of simple graphs (or multigraphs) $G$ such that for each $G \in \mathcal{G}$ there exists at least two non-empty disjoint proper subsets $V_{1},V_{2}\subseteq V(G)$ satisfying $V(G)\setminus(V_{1} \cup…

Combinatorics · Mathematics 2018-11-19 Cunxiang Duan , Ligong Wang , Xiangxiang Liu

We announce results about flat (linkless) embeddings of graphs in 3-space. A piecewise-linear embedding of a graph in 3-space is called {\it flat} if every circuit of the graph bounds a disk disjoint from the rest of the graph. We have…

Combinatorics · Mathematics 2016-09-06 Neil Robertson , Paul Seymour , Robin Thomas

For $k\ge 1$, we consider interleaved $k$-tuple colorings of the nodes of a graph, that is, assignments of $k$ distinct natural numbers to each node in such a way that nodes that are connected by an edge receive numbers that are strictly…

Combinatorics · Mathematics 2013-02-13 V. C. Barbosa

We prove that the number of edges of a multigraph $G$ with $n$ vertices is at most $O(n^2\log n)$, provided that any two edges cross at most once, parallel edges are noncrossing, and the lens enclosed by every pair of parallel edges in $G$…

Combinatorics · Mathematics 2022-02-24 Jacob Fox , Janos Pach , Andrew Suk

Similar to knots in S^3, any knot in a lens space has a grid diagram from which one can combinatorially compute all of its knot Floer homology invariants. We give an explicit description of the generators, differentials, and rational Maslov…

Geometric Topology · Mathematics 2008-08-05 Kenneth L. Baker , J. Elisenda Grigsby , Matthew Hedden

A network can be analyzed at different topological scales, ranging from single nodes to motifs, communities, up to the complete structure. We propose a novel intermediate-level topological analysis that considers non-overlapping subgraphs…

Computational Physics · Physics 2009-11-13 Lucas Antiqueira , Luciano da Fontoura Costa

We calculate the intersection ring of three-dimensional graph manifolds with rational coefficients and give an algebraic characterization of these rings when the manifold's underlying graph is a tree. We are able to use this…

Geometric Topology · Mathematics 2015-03-23 Margaret I. Doig , Peter D. Horn

Let $Y_{3,2}$ be the 3-graph with two edges intersecting in two vertices. We prove that every 3-graph $ H $ on $ n $ vertices with at least $ \max \left \{ \binom{4\alpha n}{3}, \binom{n}{3}-\binom{n-\alpha n}{3} \right \}+o(n^3) $ edges…

Combinatorics · Mathematics 2024-04-16 Jie Han , Lin Sun , Guanghui Wang

In this expository paper we present some ideas of algebraic topology (more precisely, of homology theory) in a language accessible to non-specialists in the area. A $1$-cycle in a graph is a set $C$ of edges such that every vertex is…

History and Overview · Mathematics 2026-01-08 A. Miroshnikov , O. Nikitenko , A. Skopenkov

In these notes, I will sketch a new approach to Khovanov homology of knots and links based on counting the solutions of certain elliptic partial differential equations in four and five dimensions. The equations are formulated on four and…

Geometric Topology · Mathematics 2012-10-03 Edward Witten

Let $G$ be a graph on $n$ vertices. An induced subgraph $H$ of $G$ is called heavy if there exist two nonadjacent vertices in $H$ with degree sum at least $n$ in $G$. We say that $G$ is $H$-heavy if every induced subgraph of $G$ isomorphic…

Combinatorics · Mathematics 2011-09-20 Binlong Li , Zdeněk Ryjáček , Ying Wang , Shenggui Zhang

Every link in R^3 can be represented by a one-vertex ribbon graph. We prove a Markov type theorem on this subset of link diagrams.