English
Related papers

Related papers: More rigorous results on the Kauffman-Levin model …

200 papers

Darwinian evolution can be modeled in general terms as a flow in the space of fitness (i.e. reproductive rate) distributions. In the diffusion approximation, Tsimring et al. have showed that this flow admits "fitness wave" solutions:…

Populations and Evolution · Quantitative Biology 2017-01-30 Matteo Smerlak , Ahmed Youssef

We investigate the evolutionary dynamics of a finite population of sequences adapting to NK fitness landscapes. We find that, unlike in the case of an infinite population, the average fitness in a finite population is maximized at a small…

Biological Physics · Physics 2009-11-07 Paulo R. A. Campos , Christoph Adami , Claus O. Wilke

Kingman's model describes the evolution of a one-locus haploid population of infinite size and discrete generations under the competition of selection and mutation. A random generalisation has been made in a previous paper which assumes all…

Probability · Mathematics 2020-12-01 Linglong Yuan

The Bak--Sneppen model is an abstract representation of a biological system that evolves according to the Darwinian principles of random mutation and selection. The species in the system are characterized by a numerical fitness value…

Probability · Mathematics 2015-06-23 Eckhard Schlemm

We consider a periodic extension of the classical Kingman non-linear model (Kingman, 1978) for the balance between selection and mutation in a large population. In the original model, the fitness distribution of the population is modeled by…

Probability · Mathematics 2024-05-24 Camille Coron , Olivier Hénard

Kauffman's NK-model is a paradigmatic example of a class of stochastic models of genotypic fitness landscapes that aim to capture generic features of epistatic interactions in multilocus systems. Genotypes are represented as sequences of…

Populations and Evolution · Quantitative Biology 2018-04-04 Sungmin Hwang , Benjamin Schmiegelt , Luca Ferretti , Joachim Krug

A fitness landscape is a genetic space -- with two genotypes adjacent if they differ in a single locus -- and a fitness function. Evolutionary dynamics produce a flow on this landscape from lower fitness to higher; reaching equilibrium only…

Populations and Evolution · Quantitative Biology 2013-08-26 Artem Kaznatcheev

We considered a {multi-block} molecular model of biological evolution, in which fitness is a function of the mean types of alleles located at different parts (blocks) of the genome. We formulated an infinite population model with selection…

Populations and Evolution · Quantitative Biology 2015-06-12 David B. Saakian , Zara Kirakosyan , Chin-Kun Hu

Consider the following evolution model, proposed in \cite{BS} by Bak and Sneppen. Put $N$ vertices on a circle, spaced evenly. Each vertex represents a certain species. We associate with each vertex a random variable, representing the…

Disordered Systems and Neural Networks · Physics 2007-05-23 R. Meester , D. Znamenski

We study the distribution of the maximum of a set of random fitnesses with fixed number of mutations in a model of biological evolution. The fitness variables are not independent and the correlations can be varied via a parameter…

Statistical Mechanics · Physics 2015-05-14 Kavita Jain , Abhishek Dasgupta , Gayatri Das

We suggest a new method to compute the asymptotic fitness distribution in the Bak-Sneppen model of biological evolution. As applications we derive the full asymptotic distribution in the four-species model, and give an explicit linear…

Populations and Evolution · Quantitative Biology 2015-05-19 Eckhard Schlemm

For a one-locus haploid infinite population with discrete generations, the celebrated Kingman's model describes the evolution of fitness distributions under the competition of selection and mutation, with a constant mutation probability.…

Probability · Mathematics 2021-06-01 Linglong Yuan

We study a class of evolution models, where the breeding process involves an arbitrary exchangeable process, allowing for mutations to appear. The population size $n$ is fixed, hence after breeding, selection is applied. Individuals are…

Probability · Mathematics 2022-05-03 Daniela Bertacchi , Juri Lember , Fabio Zucca

We present a mechanistic formalism for the study of evolutionary dynamics models based on the diffusion approximation described by the Kimura Equation. In this formalism, the central component is the fitness potential, from which we obtain…

Populations and Evolution · Quantitative Biology 2018-08-23 Fabio A. C. C. Chalub , Max O. Souza

Kingman's model of selection and mutation studies the limit type value distribution in an asexual population of discrete generations and infinite size undergoing selection and mutation. This paper generalizes the model to analyse the…

Probability · Mathematics 2016-09-21 Linglong Yuan

This work presents a population genetic model of evolution, which includes haploid selection, mutation, recombination, and drift. The mutation-selection equilibrium can be expressed exactly in closed form for arbitrary fitness functions…

Populations and Evolution · Quantitative Biology 2023-02-28 Jenny M. Poulton , Lee Altenberg , Chris Watkins

We consider a model of a population of fixed size $N$ undergoing selection. Each individual acquires beneficial mutations at rate $\mu_N$, and each beneficial mutation increases the individual's fitness by $s_N$. Each individual dies at…

Probability · Mathematics 2015-07-03 Jason Schweinsberg

Biological evolution in a sequence space with random fitnesses is studied within Eigen's quasispecies model. A strong selection limit is employed, in which the population resides at a single sequence at all times. Evolutionary trajectories…

Statistical Mechanics · Physics 2009-11-07 Joachim Krug , Christian Karl

One of the key problems related to the Bak-Sneppen evolution model on the circle is to compute the limit distribution of the fitness at a fixed observation vertex in the stationary regime, as the size of the system tends to infinity.…

Disordered Systems and Neural Networks · Physics 2007-05-23 R. Meester , D. Znamenski

We use a path integral representation to solve the Eigen and Crow-Kimura molecular evolution models for the case of multiple fitness peaks with arbitrary fitness and degradation functions. In the general case, we find that the solution to…

Populations and Evolution · Quantitative Biology 2007-05-23 D. B. Saakian , E. Munoz , Chin-Kun Hu , M. W. Deem
‹ Prev 1 2 3 10 Next ›