Related papers: Expected length of the longest common subsequence …

In the longest common substring problem, we are given two strings of length $n$ and must find a substring of maximal length that occurs in both strings. It is well known that the problem can be solved in linear time, but the solution is not…

We are interested in the statistics of the length of the longest increasing subsequence of 2-rowed lexicographically sorted arrays chosen according to distinct families of distributions D = (D_n)_n, and when n goes to infinity. This…

The length is(w) of the longest increasing subsequence of a permutation w in the symmetric group S_n has been the object of much investigation. We develop comparable results for the length as(w) of the longest alternating subsequence of w,…

The recently introduced longest common substring with $k$-mismatches ($k$-LCF) problem is to find, given two sequences $S_1$ and $S_2$ of length $n$ each, a longest substring $A_1$ of $S_1$ and $A_2$ of $S_2$ such that the Hamming distance…

Let $LA_{n}(\tau)$ be the length of the longest alternating subsequence of a uniform random permutation $\tau\in[n]$. Classical probabilistic arguments are used to rederive the asymptotic mean, variance and limiting law of $LA_{n}(\tau)$.…

The distributions of the $m$-th longest runs of multivariate random sequences are considered. For random sequences made up of $k$ kinds of letters, the lengths of the runs are sorted in two ways to give two definitions of run length…

For a word $S$, let $f(S)$ be the largest integer $m$ such that there are two disjoints identical (scattered) subwords of length $m$. Let $f(n, \Sigma) = \min \{f(S): S \text{is of length} n, \text{over alphabet} \Sigma \}$. Here, it is…

The deletion distance between two binary words $u,v \in \{0,1\}^n$ is the smallest $k$ such that $u$ and $v$ share a common subsequence of length $n-k$. A set $C$ of binary words of length $n$ is called a $k$-deletion code if every pair of…

A word on $q$ symbols is a sequence of letters from a fixed alphabet of size $q$. For an integer $k\ge 1$, we say that a word $w$ is $k$-universal if, given an arbitrary word of length $k$, one can obtain it by removing entries from $w$. It…

Given a finite nonempty sequence S of integers, write it as XY^k, where Y^k is a power of greatest exponent that is a suffix of S: this k is the curling number of S. The Curling Number Conjecture is that if one starts with any initial…

Let $\Sigma$ be an alphabet. For two strings $X$, $Y$, and a constrained string $P$ over the alphabet $\Sigma$, the constrained longest common subsequence and substring problem for two strings $X$ and $Y$ with respect to $P$ is to find a…

We show that the longest k-alternating substring of a random permutation has length asymptotic to 2 (n-k) / 3.

Given uniform probability on words of length M=Np+k, from an alphabet of size p, consider the probability that a word (i) contains a subsequence of letters (p, p-1,...,1) in that order and (ii) that the maximal length of the disjoint union…

Let $A_n=(a_0,a_1,\dots,a_{n-1})$ be drawn uniformly at random from $\{-1,+1\}^n$ and define \[ M(A_n)=\max_{0<u<n}\,\Bigg|\sum_{j=0}^{n-u-1}a_ja_{j+u}\Bigg|\quad\text{for $n>1$}. \] It is proved that $M(A_n)/\sqrt{n\log n}$ converges in…

A permutation $\sigma \in S_n$ is a $k$-superpattern (or $k$-universal) if it contains each $\tau \in S_k$ as a pattern. This notion of "superpatterns" can be generalized to words on smaller alphabets, and several questions about…

Let $\widetilde{\alpha}$ be a length-$L$ cyclic sequence of characters from a size-$K$ alphabet $\mathcal{A}$ such that the number of occurrences of any length-$m$ string on $\mathcal{A}$ as a substring of $\widetilde{\alpha}$ is $\lfloor L…

We look at the number $L(n)$ of $O$-sequences of length $n$. Recall that an $O$-sequence can be defined algebraically as the Hilbert function of a standard graded $k$-algebra, or combinatorially as the $f$-vector of a multicomplex. The…

Given a finite nonempty sequence of integers S, by grouping adjacent terms it is always possible to write it, possibly in many ways, as S = X Y^k, where X and Y are sequences and Y is nonempty. Choose the version which maximizes the value…

Longest common extension queries (often called longest common prefix queries) constitute a fundamental building block in multiple string algorithms, for example computing runs and approximate pattern matching. We show that a sequence of $q$…

We consider the general problem of the Longest Common Subsequence (LCS) on weighted sequences. Weighted sequences are an extension of classical strings, where in each position every letter of the alphabet may occur with some probability.…