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The reconstruction of a central tendency `species tree' from a large number of conflicting gene trees is a central problem in systematic biology. Moreover, it becomes particularly problematic when taxon coverage is patchy, so that not all…

Populations and Evolution · Quantitative Biology 2013-07-22 Mike Steel

A graph property is said to be elusive ( evasive) if every algorithm testing this property by asking questions of the form "is there an edge between vertices x and y" requires, in the worst case, to ask about all pairs of vertices. The…

Combinatorics · Mathematics 2022-06-22 Tamás Csernák , Lajos Soukup

Convolutional neural networks often dominate fully-connected counterparts in generalization performance, especially on image classification tasks. This is often explained in terms of 'better inductive bias'. However, this has not been made…

Machine Learning · Computer Science 2021-05-05 Zhiyuan Li , Yi Zhang , Sanjeev Arora

The deterministic selection-recombination equation describes the evolution of the genetic type composition of a population under selection and recombination in a law of large numbers regime. So far, an explicit solution has seemed out of…

Probability · Mathematics 2023-04-26 Ellen Baake , Frederic Alberti

The statement ``no nonabelian simple group can be obtained from a nonsimple group by adding one generator and one relator" 1) is equivalent to the Kervaire--Laudenbach conjecture; 2) becomes true under the additional assumption that the…

Group Theory · Mathematics 2016-09-07 Anton A. Klyachko

In this paper, a simple explanation for the Goldbach Conjecture is given. We have shown that the probability of violating the conjecture not only for the prime numbers, but also for any subset of natural numbers whose distribution is…

Number Theory · Mathematics 2023-02-07 Ameneh Farhadian , Hamid Reza Fanai

This manuscript contains an outline of lectures course "Evolutionary Algorithms" read by the author. The course covers Canonic Genetic Algorithm and various other genetic algorithms as well as evolutionary strategies, genetic programming,…

Neural and Evolutionary Computing · Computer Science 2022-03-31 Anton V. Eremeev

Counterfactual explanations elucidate algorithmic decisions by pointing to scenarios that would have led to an alternative, desired outcome. Giving insight into the model's behavior, they hint users towards possible actions and give grounds…

Machine Learning · Statistics 2024-04-05 Susanne Dandl , Kristin Blesch , Timo Freiesleben , Gunnar König , Jan Kapar , Bernd Bischl , Marvin Wright

Although degree bounds and algorithms for the generators of various invariant rings have been known for decades, little is known about the cardinality of minimal generating sets. Estimates of such would provide lower bounds for the runtime…

Commutative Algebra · Mathematics 2011-06-15 Harlan Kadish

Generalised Probabilistic Theories (GPTs) provide a unifying framework encompassing classical theories, quantum theories, as well as hypothetical alternatives. We investigate the problem of extending a system with a finite set of…

Quantum Physics · Physics 2026-03-17 Serge Massar

Multi-model inference covers a wide range of modern statistical applications such as variable selection, model confidence set, model averaging and variable importance. The performance of multi-model inference depends on the availability of…

Statistics Theory · Mathematics 2019-06-07 Ching-Wei Cheng , Guang Cheng

A first step in exploring population structure in crop plants and other organisms is to define the number of subpopulations that exist for a given data set. The genetic marker data sets being generated have become increasingly large over…

Applications · Statistics 2014-01-09 Mark A. Newell , Dianne Cook , Heike Hofmann , Jean-Luc Jannink

The genetic code has been shown to be very error robust compared to randomly selected codes, but to be significantly less error robust than a certain code found by a heuristic algorithm. We formulate this optimisation problem as a Quadratic…

Quantitative Methods · Quantitative Biology 2015-03-13 Harry Buhrman , Peter T. S. van der Gulik , Steven M. Kelk , Wouter M. Koolen , Leen Stougie

According to the Tits conjecture proved by Crisp and Paris, [CP], the subgroups of the braid group generated by proper powers of the Artin elements are presented by the commutators of generators which are powers of commuting elements. Hence…

Group Theory · Mathematics 2009-04-10 Michael Lönne

We present two related conjectures, arising in work on i-matchings in random r-regular bipartite graphs. The conjectures themselves are easily stated and involve only basic properties of convergent power series. One formulation involves…

Combinatorics · Mathematics 2020-02-11 Paul Federbush

Genetic Programming is an evolutionary algorithm that generates computer programs, or mathematical expressions, to solve complex problems. In this Guide, we demonstrate how to use Genetic Programming to develop surrogate models to mitigate…

We consider the evolution of populations under the joint action of mutation and differential reproduction, or selection. The population is modelled as a finite-type Markov branching process in continuous time, and the associated…

Populations and Evolution · Quantitative Biology 2009-02-23 Ellen Baake , Hans-Otto Georgii

We present methods for inference about relationships between contributors to a DNA mixture and other individuals of known genotype: a basic example would be testing whether a contributor to a mixture is the father of a child of known…

Applications · Statistics 2017-01-30 Peter J. Green , Julia Mortera

Mounting evidence suggests that natural populations can harbor extensive fitness diversity with numerous genomic loci under selection. It is also known that genealogical trees for populations under selection are quantifiably different from…

Populations and Evolution · Quantitative Biology 2013-01-04 Adel Dayarian , Boris I Shraiman

We explore the Collatz conjecture and its variants through the lens of termination of string rewriting. We construct a rewriting system that simulates the iterated application of the Collatz function on strings corresponding to mixed…

Logic in Computer Science · Computer Science 2023-01-03 Emre Yolcu , Scott Aaronson , Marijn J. H. Heule