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It is shown that if T is a connected nontrivial graph and X is an arbitrary finite simplicial complex, then there is a graph G such that the complex Hom(T,G) is homotopy equivalent to X. The proof is constructive, and uses a nerve lemma.…
In the hyperbolic plane there are infinite regular lattices. From a fix vertex of a lattice tree graphs can be constructed recursively to the next layers with edges of the lattice. In this article we examine the properties of the growing of…
This paper proves that two differently defined rooted binary trees are isomorphic. The first tree is one associated to a version of Farey sequences where the vertices correspond to the open intervals formed by two successive terms in the…
We construct a homotopy initial functor from the partition complex of a finite set $A$ to a category of trees with leaves labelled by $A$. As an application, this provides an equivalence between different bar constructions of an operad. In…
This short note introduces a notion of directed homotopy equivalence and of "directed" topological complexity (which elaborates on the notion that can be found in e.g. Farber's book) which have a number of desirable joint properties. In…
To every tree we associate a filtered cochain complex. Its cohomology and the corresponding spectral sequence have clear combinatorial description. If a tree is the Dynkin diagram of a simple plane curve singularity, the graded Euler…
To a definable subset of Z_p^n (or to a scheme of finite type over Z_p) one can associate a tree in a natural way. It is known that the corresponding Poincare series P(X) = \sum_i N_i X^i is rational, where N_i is the number of nodes of the…
A directed phylogenetic network is tree-child if every non-leaf vertex has a child that is not a reticulation. As a class of directed phylogenetic networks, tree-child networks are very useful from a computational perspective. For example,…
Tree structures appear in many fields of the life sciences, including phylogenetics, developmental biology and nucleic acid structures. Trees can be used to represent RNA secondary structures, which directly relate to the function of…
Treewidth is a well-known graph invariant with multiple interesting applications in combinatorics. On the practical side, many NP-complete problems are polynomial-time (sometimes even linear-time) solvable on graphs of bounded treewidth. On…
We prove detailed asymptotics for the number of spanning trees, called complexity, for a general class of discrete tori as the parameters tend to infinity. The proof uses in particular certain ideas and techniques from an earlier paper. Our…
We define, analyze, and give efficient algorithms for two kinds of distance measures for rooted and unrooted phylogenies. For rooted trees, our measures are based on the topologies the input trees induce on triplets; that is, on…
In this work we study the homotopy type of multipath complexes of bidirectional path graphs and polygons, motivated by works of Vre\'cica and \v{Z}ivaljevi\'c on cycle-free chessboard complexes (that is, multipath complexes of complete…
The probability that two randomly selected phylogenetic trees of the same size are isomorphic is found to be asymptotic to a decreasing exponential modulated by a polynomial factor. The number of symmetrical nodes in a random phylogenetic…
Tree sets are abstract structures that can be used to model various tree-shaped objects in combinatorics. Finite tree sets can be represented by finite graph-theoretical trees. We extend this representation theory to infinite tree sets.…
Arone and the second author showed that when the dimensions are in the stable range, the rational homology and homotopy of the high dimensional anologues of spaces of long knots can be calculated as the homology of a direct sum of finite…
We study the homotopy theory of diagrams of chain complexes over a field indexed by a finite poset, and show that it can be completely described in terms of appropriate diagrams of graded vector spaces.
We explore resolutions of monomial ideals supported by simplicial trees. We argue that since simplicial trees are acyclic, the criterion of Bayer, Peeva and Sturmfels for checking if a simplicial complex supports a free resolution of a…
Let $n \ge 2$ be an integer. In this note, we show that the {\it oriented} transition matrices over the field $\mathcal R$ of all real numbers (over the finite field $\mathcal Z_2$ of two elements respectively) of all continuous {\it vertex…
Let X be a complex projective variety of dimension n with only isolated normal singularities. In this paper we prove, using mixed Hodge theory, that if the link of each singular point of X is (n-2)-connected, then X is a formal topological…