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We associate root polytopes to directed graphs and study them by using ribbon structures. Most attention is paid to what we call the semi-balanced case, i.e., when each cycle has the same number of edges pointing in the two directions.…
A matching complex of a simple graph $G$ is a simplicial complex with faces given by the matchings of $G$. The topology of matching complexes is mysterious; there are few graphs for which the homotopy type is known. Marietti and Testa…
The question of shellability of complexes of directed trees was asked by R. Stanley. D. Kozlov showed that the existence of a complete source in a directed graph provides a shelling of its complex of directed trees. We will show that this…
We generalize some homotopy calculation techniques such as splittings and matching trees that are introduced for the computations in the case of the independence complexes of graphs to arbitrary simplicial complexes, and exemplify their…
In this paper we study natural reconfiguration spaces associated to the problem of distributing a fixed number of resources to labeled nodes of a tree network, so that no node is left empty. These spaces turn out to be cubical complexes,…
In this article, Temperley's bijection between spanning trees of the square grid on the one hand, and perfect matchings (also known as dimer coverings) of the square grid on the other, is extended to the setting of general planar directed…
In this article, we discuss the vertex decomposability of three well-studied simplicial complexes associated to forests. In particular, we show that the bounded degree complex of a forest and the complex of directed trees of a multidiforest…
Consider the space of continuous functions on a geometric tree $X$ whose persistent homology gives rise to a finite generic barcode $D$. We show that there are exactly as many path connected components in this space as there are merge trees…
We prove that every oriented tree on $n$ vertices with bounded maximum degree appears as a spanning subdigraph of every directed graph on $n$ vertices with minimum semidegree at least $n/2+o(n)$. This can be seen as a directed graph…
This paper outlines a method to determine whether two label-regular directed trees, are isomorphic and when they are almost isomorphic. The approach involves reinterpreting label-regular directed trees as universal covers of rooted graphs.…
Inspired by natural classes of examples, we define generalized directed semi-tree and construct weighted shifts on the generalized directed semi-trees. Given an $n$-tuple of directed directed semi-trees with certain properties, we associate…
We characterise digraphs of directed treewidth one in terms of forbidden butterfly minors. Moreover, we show that there is a linear relation between the hypertree-width of the dual of the cycle hypergraph of D, i. e. the hypergraph with…
The theory of complexes of directed trees was initiated by Kozlov to answer a question by Stanley, and later on, results from the theory were used by Babson and Kozlov in their proof of the Lovasz conjecture. We develop the theory and prove…
We study two simplicial complexes arising from a directed graph $G = (V, E)$ with two chosen vertices $s$ and $t$: the *path-free complex*, consisting of all subsets $F \subseteq E$ that contain no path from $s$ to $t$, and the…
Simplicial type theory extends homotopy type theory with a directed path type which internalizes the notion of a homomorphism within a type. This concept has significant applications both within mathematics -- where it allows for synthetic…
Topologically constrained genome-like polymers often double-fold into tree-like configurations, which can be modelled on the level of folded (ring) polymers or on the level of the underlying random trees. For both descriptions, we have…
The tree complex is a simplicial complex defined in recent work of Belk, Lanier, Margalit, and Winarski with natural applications to mapping class groups and complex dynamics. In this article, we connect this setting with the study of…
Using ideas from shape theory we embed the coarse category of metric spaces into the category of direct sequences of simplicial complexes with bonding maps being simplicial. Two direct sequences of simplicial complexes are equivalent if one…
Symmetric edge polytopes of graphs and root polytopes of semi-balanced digraphs are two classes of lattice polytopes whose $h^*$-polynomials have interesting properties and generalize important graph polynomials. For both classes of…
Quasi-trees generalize trees in that the unique "path" between two nodes may be infinite and have any countable order type. They are used to define the rank-width of a countable graph in such a way that it is equal to the least upper-bound…