Related papers: Approximating Ropelength by Energy Functions
In the past decade, optical vortex knots with axial dimensions on the order of $10^2-10^5$ wavelengths ($\lambda$) have been implemented in the laboratory. However, many potential applications require a drastic reduction on the the size of…
We use computer simulations to compare the dynamical behaviour of torus and even-twist knots in polymers under tension. The knots diffuse through a mechanism similar to reptation. Their friction coefficients grow linearly with average knot…
In this paper, we investigate three geometrical invariants of knots, the height, the trunk and the representativity. First, we give a conterexample for the conjecture which states that the height is additive under connected sum of knots. We…
We construct a tractable model to describe the rate at which a knotted polymer is ejected from a spherical capsid via a small pore. Knots are too large to fit through the pore and must reptate to the end of the polymer for ejection to…
In this paper, we determine geometric information on slope lengths of a large class of knots in the 3-sphere, based only on diagrammatical properties of the knots. In particular, we show such knots have meridian length strictly less than 4,…
We construct families of trivial $2$-knots $K_i$ in $\mathbb{R}^4$ such that the maximal complexity of $2$-knots in any isotopy connecting $K_i$ with the standard unknot grows faster than a tower of exponentials of any fixed height of the…
The maximum length of the shortest path from a leaf to the root of a skein tree for knots and links gives a measure of the complexity of computing link polynomials by the skein relation (the Jones polynomial, the Alexander-Conway…
The shape of the most tight trefoil knot with N=200640 vertices found with an appropriately modified finite element method is analyzed. The high number of vertices makes plots of its curvature and torsion very precise what allows the…
The thickness, NIR(K) of a knot or link K is defined to be the radius of the largest solid tube one can put around the curve without any self intersections, which is also known as the normal injectivity radius of K. For C^{1,1} curves K,…
Let $K$ be a knot type for which the quadratic term of the Conway polynomial is nontrivial, and let $\gamma: \mathbb{R}\to \mathbb{R}^3$ be an analytic $\mathbb{Z}$-periodic function with non-vanishing derivative which parameterizes a knot…
We define the knotting probability of a knot $K$ by the probability for a random polygon (RP) or self-avoiding polygon (SAP) of $N$ segments having the knot type $K$. We show fundamental and generic properties of the knotting probability…
We employ computer simulations and thermodynamic integration to analyse the effects of bending rigidity and slit confinement on the free energy cost of tying knots, $\Delta F_{\rm knotting}$, on polymer chains under tension. A…
Given a thin strip of paper, tie a knot, connect the ends, and flatten into the plane. This is a physical model of a folded ribbon knot in the plane, first introduced by Louis Kauffman. We study the folded ribbonlength of these folded…
Besides mathematical interest, knots and knot theory have important applications in physics, chemistry, and biology. Stasiak and colleagues devised a constructive method for a knot "energy" using a Metropolis Monte Carlo algorithm to…
Using a lattice model of polymers in a tube, we define one way to characterise different configurations of a given knot as either "local" or "non-local" and, for several ring polymer models, we provide both theoretical and numerical…
Lower bounds are given for the depths of R/I^t for t at least one when I is the edge ideal of a tree or forest. The bounds are given in terms of the diameter of the tree, or in case of a forest, the largest diameter of a connected component…
The freely jointed chain is often applied to model the thermodynamics of single polymer chains, but the traditional formulation of the model lacks internal energy changes due to bond stretching. For this reason, the extensible freely…
We establish a new fundamental relationship between total curvature of knots and crossing number. If K is a smooth knot in 3-space, R the cross-section radius of a uniform tube neighborhood of K, L the arclength of K, and k the total…
The ribbonlength of a link is a geometric invariant defined as the infimum of the ratio of the length to the width of a folded ribbon realization of the link. In this paper, we prove that if an alternating link admits an alternating diagram…
We study Kauffman's model of folded ribbon knots: knots made of a thin strip of paper folded flat in the plane. The ribbonlength is the length to width ratio of such a ribbon, and it turns out that the way the ribbon is folded influences…