Related papers: Decorrelating Topology with HMC

By leveraging the natural geometry of a smooth probabilistic system, Hamiltonian Monte Carlo yields computationally efficient Markov Chain Monte Carlo estimation. At least provided that the algorithm is sufficiently well-tuned. In this…

Conformational transitions are ubiquitous in biomolecular systems, have significant functional roles and are subject to evolutionary pressures. Here we provide a first theoretical framework for topological transition, i.e. conformational…

We present simulation results employing overlap fermions for the axial correlation functions in the epsilon-regime of chiral perturbation theory. In this regime, finite size effects and topology play a dominant role. Their description by…

In this article, we analyze Hamiltonian Monte Carlo (HMC) by placing it in the setting of Riemannian geometry using the Jacobi metric, so that each step corresponds to a geodesic on a suitable Riemannian manifold. We then combine the notion…

Hamiltonian Monte Carlo (HMC) has become routinely used for sampling from posterior distributions. Its extension Riemann manifold HMC (RMHMC) modifies the proposal kernel through distortion of local distances by a Riemannian metric. The…

We suggest and implement a new Monte Carlo strategy for correlated models involving fermions strongly coupled to classical degrees of freedom, with accurate handling of quenched disorder as well. Current methods iteratively diagonalise the…

Hamiltonian Monte Carlo (HMC) is a powerful Markov chain Monte Carlo (MCMC) method for performing approximate inference in complex probabilistic models of continuous variables. In common with many MCMC methods, however, the standard HMC…

Traditionally, the field of computational Bayesian statistics has been divided into two main subfields: variational methods and Markov chain Monte Carlo (MCMC). In recent years, however, several methods have been proposed based on combining…

A scheme for separating the high- and low-frequency molecular dynamics modes in Hybrid Monte Carlo (HMC) simulations of gauge theories with dynamical fermions is presented. The algorithm is tested in the Schwinger model with Wilson…

We study the vacuum topology of 2+1 flavor QCD above the chiral crossover transition, at $T \lesssim 1.2~T_c$, on lattices of size $32^3\times 8$. Since overlap fermions have exact chiral symmetry and an index theorem even on a finite…

We do not solve tensions with concordance cosmology; we do obtain $H_0\approx 74\,$km/s/Mpc from CMB+BAO+SN data in our model, but that is not the point. Discrepancies in Hubble constant values obtained by various astrophysical probes…

We determine the topological susceptibility \chi_t in the topologically-trivial sector generated by lattice simulations of N_f = 2+1 QCD with overlap Dirac fermion, on a 16^3 x 48 lattice with lattice spacing ~ 0.11 fm, for five sea quark…

We give a detailed description of the so-called Polynomial Hybrid Monte Carlo (PHMC) algorithm. The effects of the correction factor, which is introduced to render the algorithm exact, are discussed, stressing their relevance for the…

This article is concerned with the problem of minimising the Willmore energy in the class of \emph{connected} surfaces with prescribed area which are confined to a small container. We propose a phase field approximation based on De Giorgi's…

Correlated fermions are of high interest in condensed matter (Fermi liquids, Wigner molecules), cold atomic gases and dense plasmas. Here we propose a novel approach to path integral Monte Carlo (PIMC) simulations of strongly degenerate…

The Hamiltonian Monte Carlo (HMC) sampling algorithm exploits Hamiltonian dynamics to construct efficient Markov Chain Monte Carlo (MCMC), which has become increasingly popular in machine learning and statistics. Since HMC uses the gradient…

We demonstrate the use of a variational method to determine a quantitative lower bound on the rate of convergence of Markov Chain Monte Carlo (MCMC) algorithms as a function of the target density and proposal density. The bound relies on…

We carry out a comparative study among five-dimensional formulations of chirally symmetric fermions about the algorithmic performance, chiral symmetry violation and topological tunneling to find a computationally inexpensive formulation…

We present our first set of results for charm physics, using the mixed-action setup introduced in a companion paper. Maximally twisted Wilson valence fermions are used on a sea of non-perturbatively $O(a)$-improved Wilson fermions, made up…

We describe a procedure for mapping a self-consistent mean-field theory (also known as density functional theory) into a shell model Hamiltonian that includes quadrupole-quadrupole and monopole pairing interactions in a truncated space. We…