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A novel definition of the stimulus-specific information is presented, which is particularly useful when the stimuli constitute a continuous and metric set, as for example, position in space. The approach allows one to build the spatial…

Disordered Systems and Neural Networks · Physics 2007-05-23 Michele Bezzi , Ines Samengo , Stefan Leutgeb , Sheri Mizumori

As subjects perceive the sensory world, different stimuli elicit a number of neural representations. Here, a subjective distance between stimuli is defined, measuring the degree of similarity between the underlying representations. As an…

Neurons and Cognition · Quantitative Biology 2007-05-23 D. Oliva , I. Samengo , S. Leutgeb , S. Mizumori

To gain insight into the neural events responsible for visual perception of static and dynamic optical patterns, we study how neural activation spreads in arrays of inhibition-stabilized neural networks with nearest-neighbor coupling. The…

Neurons and Cognition · Quantitative Biology 2016-09-02 Sergey Savel'ev , Sergei Gepshtein

Statistical properties of spike trains measured from a sensory neuron in-vivo are studied experimentally and theoretically. Experiments are performed on an identified neuron in the visual system of the blowfly. It is shown that the spike…

Biological Physics · Physics 2007-05-23 N. Brenner , O. Agam , W. Bialek , R. de Ruyter van Steveninck

Animals learn to predict external contingencies from experience through a process of conditioning. A natural mechanism for conditioning is stimulus substitution, whereby the neuronal response to a stimulus with no prior behavioral…

Neurons and Cognition · Quantitative Biology 2024-09-23 Pantelis Vafidis , Antonio Rangel

The ability of the organism to distinguish between various stimuli is limited by the structure and noise in the population code of its sensory neurons. Here we infer a distance measure on the stimulus space directly from the recorded…

Neurons and Cognition · Quantitative Biology 2013-06-14 Gašper Tkačik , Einat Granot-Atedgi , Ronen Segev , Elad Schneidman

This paper considers a sequential sensor scheduling and remote estimation problem with one sensor and one estimator. The sensor makes sequential observations about the state of an underlying memoryless stochastic process and makes a…

Optimization and Control · Mathematics 2016-10-19 Xiaobin Gao , Emrah Akyol , Tamer Basar

The capacity with which a system of independent neuron-like units represents a given set of stimuli is studied by calculating the mutual information between the stimuli and the neural responses. Both discrete noiseless and continuous noisy…

Disordered Systems and Neural Networks · Physics 2007-05-23 Ines Samengo , Alessandro Treves

Significant challenges exist in efficient data analysis of most advanced experimental and observational techniques because the collected signals often include unwanted contributions--such as background and signal distortions--that can…

Computer Vision and Pattern Recognition · Computer Science 2025-07-08 Yuan Ni , Zhantao Chen , Alexander N. Petsch , Edmund Xu , Cheng Peng , Alexander I. Kolesnikov , Sugata Chowdhury , Arun Bansil , Jana B. Thayer , Joshua J. Turner

Inhibition is considered to shape neural activity, and broaden its pattern repertoire. In the sensory organs, where the anatomy of neural circuits is highly structured, lateral inhibition sharpens contrast among stimulus properties. The…

Neurons and Cognition · Quantitative Biology 2018-09-18 Netta Haroush , Shimon Marom

Perception is often viewed as a process that transforms physical variables, external to an observer, into internal psychological variables. Such a process can be modeled by a function coined perceptual scale. The perceptual scale can be…

Neurons and Cognition · Quantitative Biology 2024-03-19 Jonathan Vacher , Pascal Mamassian

To compensate for sensory processing delays, the visual system must make predictions to ensure timely and appropriate behaviors. Recent work has found predictive information about the stimulus in neural populations early in vision…

Neurons and Cognition · Quantitative Biology 2018-10-05 Audrey J. Sederberg , Jason N. MacLean , Stephanie E. Palmer

This paper considers a sequential estimation and sensor scheduling problem with one sensor and one estimator. The sensor makes sequential observations about the state of an underlying memoryless stochastic process, and makes a decision as…

Systems and Control · Computer Science 2016-11-17 Xiaobin Gao , Emrah Akyol , Tamer Basar

What can representational similarity matrices (RSMs) tell us about a neural code? As the popularity of these summary statistics grows, so too does the need for a more complete characterization of their properties. Here, we show that…

Neurons and Cognition · Quantitative Biology 2026-05-21 Farhad Pashakhanloo , Jacob A. Zavatone-Veth

Current strategies in system science with a focus on neuroscience do differ in their methodological approach when exploring and trying to analyze a system in order to detect supposed underlying principle processes in its inherent actions,…

General Physics · Physics 2009-03-31 Oliver Zafiris

Spatial profiling technologies in biology, such as imaging mass cytometry (IMC) and spatial transcriptomics (ST), generate high-dimensional, multi-channel data with strong spatial alignment and complex inter-channel relationships.…

Machine Learning · Computer Science 2025-07-08 Haoran Zhang , Mingyuan Zhou , Wesley Tansey

To study information processing in the brain, neuroscientists manipulate experimental stimuli while recording participant brain activity. They can then use encoding models to find out which brain "zone" (e.g. which region of interest,…

Neurons and Cognition · Quantitative Biology 2022-02-22 Mariya Toneva , Jennifer Williams , Anand Bollu , Christoph Dann , Leila Wehbe

Humans and other animals base their decisions on noisy sensory input. Much work has therefore been devoted to understanding the computations that underly such decisions. The problem has been studied in a variety of tasks and with stimuli of…

Neurons and Cognition · Quantitative Biology 2015-03-05 Manisha Bhardwaj , Sam Carroll , Wei Ji Ma , Kresimir Josic

In this article, a general information-plus-noise transmission model is assumed, the receiver end of which is composed of a large number of sensors and is unaware of the noise pattern. For this model, and under reasonable assumptions, a set…

Information Theory · Computer Science 2015-06-12 Julia Vinogradova , Romain Couillet , Walid Hachem

Identifying stimulus-driven neural activity patterns is critical for studying the neural basis of cognition. This can be particularly challenging in intracranial datasets, where electrode locations typically vary across patients. This…

Neurons and Cognition · Quantitative Biology 2022-02-07 Jeremy R. Manning