Related papers: Evaluation of text data mining for database curati…
Text reuse is a methodological element of fundamental importance in humanities research: pieces of text that re-appear across different documents, verbatim or paraphrased, provide invaluable information about the historical spread and…
Drug-drug interaction (DDI) is a major cause of morbidity and mortality and a subject of intense scientific interest. Biomedical literature mining can aid DDI research by extracting evidence for large numbers of potential interactions from…
High throughput extraction and structured labeling of data from academic articles is critical to enable downstream machine learning applications and secondary analyses. We have embedded multimodal data curation into the academic publishing…
There is growing interest in mining software repository data to understand, and predict, various aspects of team processes. In particular, text mining and natural-language processing (NLP) techniques have supported such efforts.…
The Information and Communication Technologies revolution brought a digital world with huge amounts of data available. Enterprises use mining technologies to search vast amounts of data for vital insight and knowledge. Mining tools such as…
Question answering over knowledge bases (KBQA) has become a popular approach to help users extract information from knowledge bases. Although several systems exist, choosing one suitable for a particular application scenario is difficult.…
Health literacy has emerged as a crucial factor in making appropriate health decisions and ensuring treatment outcomes. However, medical jargon and the complex structure of professional language in this domain make health information…
Text mining is a process of extracting information of interest from text. Such a method includes techniques from various areas such as Information Retrieval (IR), Natural Language Processing (NLP), and Information Extraction (IE). In this…
Large text corpora, such as Reddit posts, have become an increasingly prevalent site of qualitative inquiry. However, most large text corpora are intractable for qualitative researchers. Instead, teams rely on statistical subsampling to…
Identifying cohorts of patients based on eligibility criteria such as medical conditions, procedures, and medication use is critical to recruitment for clinical trials. Such criteria are often most naturally described in free-text, using…
Over the past decade there has been a significant growth in bioinformatics databases, tools and resources. Although, bioinformatics is becoming more specific, increasing the number of bioinformatics-wares has made it difficult for…
The notions of knowledge and its management have been at the core of the information systems (IS) field almost since its inception. Knowledge has been viewed in several ways in the prior literature, including as a state of mind, an object,…
Large Language Models (LLMs) have fundamentally transformed approaches to Natural Language Processing (NLP) tasks across diverse domains. In healthcare, accurate and cost-efficient text classification is crucial, whether for clinical notes…
We propose TuringAdvice, a new challenge task and dataset for language understanding models. Given a written situation that a real person is currently facing, a model must generate helpful advice in natural language. Our evaluation…
Background Medical and life science research generates millions of publications, and it is a great challenge for researchers to utilize this information in full since its scale and complexity greatly surpasses human reading capabilities.…
The abundance of literature related to the widespread COVID-19 pandemic is beyond manual inspection of a single expert. Development of systems, capable of automatically processing tens of thousands of scientific publications with the aim to…
Effective data-driven biomedical discovery requires data curation: a time-consuming process of finding, organizing, distilling, integrating, interpreting, annotating, and validating diverse information into a structured form suitable for…
Large language models (LLMs) bring unprecedented flexibility in defining and executing complex, creative natural language generation (NLG) tasks. Yet, this flexibility brings new challenges, as it introduces new degrees of freedom in…
An increasing number of data and knowledge sources are accessible by human and software agents in the expanding Semantic Web. Sources may differ in granularity or completeness, and thus be complementary. Consequently, they should be…
This paper describes the winning solutions of all tasks in Meta KDD Cup 24 from db3 team. The challenge is to build a RAG system from web sources and knowledge graphs. We are given multiple sources for each query to help us answer the…