English
Related papers

Related papers: An integration scheme for reaction-diffusion model…

200 papers

Discrete diffusion models have emerged as a powerful generative modeling framework for discrete data with successful applications spanning from text generation to image synthesis. However, their deployment faces challenges due to the high…

Machine Learning · Computer Science 2025-12-01 Yinuo Ren , Haoxuan Chen , Yuchen Zhu , Wei Guo , Yongxin Chen , Grant M. Rotskoff , Molei Tao , Lexing Ying

We present and analyse an implicit-explicit timestepping procedure with finite element spatial approximation for a semilinear reaction-diffusion systems on evolving domains arising from biological models, such as Schnakenberg's (1979). We…

Numerical Analysis · Mathematics 2013-09-20 Omar Lakkis , Anotida Madzvamuse , Chandrasekhar Venkataraman

The trend to equilibrium for reaction-diffusion systems modelling chemical reaction networks is investigated, in the case when reaction processes happen on subsets of the domain. We prove the convergence to equilibrium by directly showing…

Analysis of PDEs · Mathematics 2024-12-17 Laurent Desvillettes , Kim Dang Phung , Bao Quoc Tang

The global-in-time existence of renormalized solutions to reaction-cross-diffu-sion systems for an arbitrary number of variables in bounded domains with no-flux boundary conditions is proved. The cross-diffusion part describes the…

Analysis of PDEs · Mathematics 2017-11-07 Xiuqing Chen , Ansgar Jüngel

We formulate and test a hybrid fluid-Monte Carlo scheme for the treatment of elastic collisions in gases and plasmas. While our primary focus and demonstrations of applicability are for moderately collisional plasmas, as described by the…

Computational Physics · Physics 2015-06-12 L. F. Ricketson , M. S. Rosin , R. E. Caflisch , Andris M. Dimits

In this work, we show high order splitting methods of integration without negative steps, allowing us to solve numerically irreversible problems, like reaction-diffusion equations. The methods consist in a suitable affine combinations of…

Numerical Analysis · Mathematics 2014-10-21 Mariano De Leo , Diego Rial , Constanza Sanchez de la Vega

We consider solvability of the generalized reaction-diffusion equation with both space- and time-dependent diffusion and reaction terms by means of the similarity method. By introducing the similarity variable, the reaction-diffusion…

Mathematical Physics · Physics 2016-01-20 C. -L. Ho , C. -C. Lee

This review focuses on the calculation of infinite nuclear matter response functions using phenomenological finite-range interactions, equipped or not with tensor terms. These include Gogny and Nakada families, which are commonly used in…

Nuclear Theory · Physics 2021-07-28 Dany Davesne , Alessandro Pastore , Jesus Navarro

A jump-diffusion process along with a particle scheme is devised as an accurate and efficient particle solution to the Boltzmann equation. The proposed process (hereafter Gamma-Boltzmann model) is devised to match the evolution of all…

Computational Physics · Physics 2023-08-09 Fabian Mies , Mohsen Sadr , Manuel Torrilhon

The boundary integral method is extended to derive closed integro-differential equations applicable to computation of the shape and propagation speed of a steadily moving spot and to the analysis of dynamic instabilities in the sharp…

Pattern Formation and Solitons · Physics 2016-09-07 L. M. Pismen

Mathematical modeling is now used commonly in the analysis of signaling networks. With advances in high resolution microscopy, the spatial location of different signaling molecules and the spatio-temporal dynamics of signaling microdomains…

Subcellular Processes · Quantitative Biology 2016-07-26 Jasmine Nirody , Padmini Rangamani

Stochastic chemical systems with diffusion are modeled with a reaction-diffusion master equation. On a macroscopic level, the governing equation is a reaction-diffusion equation for the averages of the chemical species. On a mesoscopic…

Numerical Analysis · Mathematics 2009-03-06 Stefan Engblom , Lars Ferm , Andreas Hellander , Per Lötstedt

We establish the existence of solutions to a class of non-linear stochastic differential equation of reaction-diffusion type in an infinite-dimensional space, with diffusion corresponding to a given transition kernel. The solution obtained…

Probability · Mathematics 2021-08-10 Conrado da Costa , Bernardo Freitas Paulo da Costa , Daniel Valesin

The rigorous asymptotics from reaction-cross-diffusion systems for three species with known entropy to cross-diffusion systems for two variables is investigated. The equations are studied in a bounded domain with no-flux boundary…

Analysis of PDEs · Mathematics 2017-10-11 E. S. Daus , L. Desvillettes , A. Jüngel

Self- and cross-diffusion are important nonlinear spatial derivative terms that are included into biological models of predator-prey interactions. Self-diffusion models overcrowding effects, while cross-diffusion incorporates the response…

Numerical Analysis · Mathematics 2024-12-20 Matthew A. Beauregard , Joshua L. Padgett

We briefly review some common diffusion-limited reactions with emphasis on results for two-species reactions with anisotropic hopping. Our review also covers single-species reactions. The scope is that of providing reference and general…

Condensed Matter · Physics 2010-10-12 Antonio M. R. Cadilhe , M. Lawrence Glasser , Vladimir Privman

We created an efficient algorithm suitable for graphics processing units (GPUs) to perform Monte Carlo simulations of a subset of reaction-diffusion models. The algorithm uses techniques that are specific to GPU programming, and combines…

Computational Physics · Physics 2013-03-06 R. D. Schram

This paper deals with the Darcy-Forchheimer problem with two kinds of boundary conditions. We discretize the system by using the finite element methods and we propose two iterative schemes to solve the discrete problems. The well-posedness…

Numerical Analysis · Mathematics 2021-11-23 Toni Sayah

The reaction-diffusion equation is one of the cornerstones equations in applied science and engineering. In the present study, a deep neural network has been trained in order to predict the solution of the equation with different…

Machine Learning · Computer Science 2019-12-12 Amin Karimi Monsefi , Rana Bakhtiyarzade

We propose a semi-discrete finite difference multiscale scheme for a concrete corrosion model consisting of a system of two-scale reaction-diffusion equations coupled with an ode. We prove energy and regularity estimates and use them to get…

Numerical Analysis · Mathematics 2012-07-03 Vladimír Chalupecký , Adrian Muntean