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200 papers

Using path integral technique, we show exactly that for a semiflexible biopolymer in constant extension ensemble, no matter how long the polymer and how large the external force, the effects of short range correlations in the…

Biological Physics · Physics 2009-11-13 Zicong Zhou , Bela Joos

The competing effect of a periodic pinning potential and random point disorder is studied for arrays of elastic lines or directed polymers. The groundstates are investigated by exact combinatorial optimization. In both two and three…

Statistical Mechanics · Physics 2009-10-31 T. Knetter , G. Schröder , M. J. Alava , H. Rieger

We analyze the universal size characteristics of flexible ring polymers in solutions in presence of structural obstacles (impurities) in d dimensions. One encounters such situations when considering polymers in gels, colloidal solutions,…

Soft Condensed Matter · Physics 2014-09-08 K. Haydukivska , V. Blavatska

For a directed polymer model in random environment, a characterization of the weak disorder phase in terms of the moment of the renormalized partition function has been proved in [S. Junk: Communications in Mathematical Physics 389,…

Probability · Mathematics 2023-03-06 Ryoki Fukushima , Stefan Junk

We study the conformational properties of heteropolymers containing two types of monomers A and B, modeled as self-avoiding random walks on a regular lattice. Such a model can describe in particular the sequences of hydrophobic and…

Disordered Systems and Neural Networks · Physics 2014-09-01 Viktoria Blavatska , Wolfhard Janke

We investigate the Rubinstein-Duke model for polymer reptation by means of density-matrix renormalization group techniques both in absence and presence of a driving field. In the former case the renewal time \tau and the diffusion…

Statistical Mechanics · Physics 2009-11-07 Enrico Carlon , Andrzej Drzewinski , J. M. J. van Leeuwen

Diffusion properties of a self-avoiding polymer embedded in regularly distributed obstacles with spacing a=20 and confined in two dimensions is studied numerically using the extended bond fluctuation method which we have developed recently.…

Soft Condensed Matter · Physics 2009-10-31 Ryuzo Azuma , Hajime Takayama

The sequence of random probability measures $\nu_n$ that gives a path of length $n$, $\unsur{n}$ times the sum of the random weights collected along the paths, is shown to satisfy a large deviations principle with good rate function the…

Probability · Mathematics 2008-08-29 Philippe Carmona

We study the effect of the crowded nature of the cellular cytoplasm on the translocation of a polymer through a pore in a membrane. By systematically treating the entropic penalty due to crowding, we show that the translocation dynamics are…

Soft Condensed Matter · Physics 2009-11-13 Ajay Gopinathan , Yong Woon Kim

We analyse scaling laws that govern macromolecules of different topology: polymer chains, homogeneous and miktoarm star polymers in a good solvent possibly constrained by a porous medium. The latter is modelled by long-range-correlated…

Soft Condensed Matter · Physics 2015-05-13 V. Blavatska , C. von Ferber , Yu. Holovatch

A small amount of polymer dissolved in a droplet suppresses droplet rebound when it impinges on a supersolvophobic surface. This work investigates impacting dynamics of a droplet of dilute polymer solution depending on the molecular weight…

Soft Condensed Matter · Physics 2021-03-30 Eunsang Lee , Hari Krishna Chilukoti , Florian Müller-Plathe

Disorder and homogeneity are two concepts that refer to spatial variation of the system potential. In condensed-matter systems disorder is typically divided into two types; those with local parameters varying from site to site (diagonal…

Disordered Systems and Neural Networks · Physics 2022-11-14 Z. Ovadyahu

The effects of quenched disorder on a single and many active run-and-tumble particles is studied in one dimension. For a single particle, we consider both the steady-state distribution and the particle's dynamics subject to disorder in…

Statistical Mechanics · Physics 2019-11-27 Ydan Ben Dor , Eric Woillez , Yariv Kafri , Mehran Kardar , Alexandre P Solon

The pinning of an inhomogeneous elastic medium by a disordered substrate is studied analytically and numerically. The static and dynamic properties of a $D$-dimensional system are shown to be equivalent to those of the well known problem of…

Statistical Mechanics · Physics 2009-10-30 D. Cule , T. Hwa

We study the path properties of a random polymer attracted to a defect line by a potential with disorder, and we prove that in the delocalized regime, at any temperature, the number of contacts with the defect line remains in a certain…

Probability · Mathematics 2014-03-21 Kenneth S. Alexander , Nikos Zygouras

We study of the dynamics of ring polymers confined to diffuse in a background gel at low concentrations. We do this in order to probe the inter-play between topology and dynamics in ring polymers. We develop an algorithm that takes into…

Soft Condensed Matter · Physics 2014-08-22 Davide Michieletto , Davide Marenduzzo , Enzo Orlandini , Gareth P. Alexander , Matthew S. Turner

We study two-dimensional wave propagation in materials whose properties vary periodically in one direction only. High order homogenization is carried out to derive a dispersive effective medium approximation. One-dimensional materials with…

Numerical Analysis · Mathematics 2014-09-16 Manuel Quezada de Luna , David I. Ketcheson

Microorganisms ofter move in confined, disordered environments, where hydrodynamic couplings can modify their transport behavior. Using extensive finite-element simulations, we investigate the dynamics of microswimmers -- modeled as…

Soft Condensed Matter · Physics 2026-03-24 Mirko Residori , Sebastian Aland , Christina Kurzthaler

We consider the motion of a particle in a periodic two dimensional flow perturbed by small (molecular) diffusion. The flow is generated by a divergence free zero mean vector field. The long time behavior corresponds to the behavior of the…

Probability · Mathematics 2009-03-04 L. Koralov

In the present work, the cyclic polymer chains (rings) in structurally disordered environment (e.g. in the cross-linked polymer gel) are studied exploiting the model of closed self-avoiding walks (SAWs) trajectories on $d=3$-dimensional…

Soft Condensed Matter · Physics 2020-11-04 K. Haydukivska , V. Blavatska