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Related papers: Freezing Transition of Compact Polyampholytes

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Polyampholytes (PAs) are polymers composed of (quenched) random sequences of positive and negatively charged monomeric groups. We show that the radius of gyration, $R_g$, of a PA strongly depends on its overall excess charge $Q$, and is…

Condensed Matter · Physics 2009-10-22 Yacov Kantor , Mehran Kardar

In random heteropolymer globules with short-range interactions between the monomers, freezing takes place at the microscopic length scale only, and can be described by a 1-step replica symmetry breaking. The fact that the long-range Coulomb…

Soft Condensed Matter · Physics 2009-10-31 Hindrik Jan Angerman , Eugene Shakhnovich

Spatial configurations of randomly charged polymers, known as polyampholytes (PAs), are very sensitive to the overall excess charge Q. Analytical arguments, supported by Monte Carlo simulations and exact enumeration studies, lead to the…

Condensed Matter · Physics 2007-11-28 Yacov Kantor , Mehran Kardar

Polyampholytes (PA) are charged polymers composed of positively and negatively charged monomers along their backbone. The sequence of the charged monomers and the bending of the chain significantly influence the conformation and dynamical…

Soft Condensed Matter · Physics 2024-08-29 Rakesh Palariya , Sunil P. Singh

The nature of electrostatic interactions involving polyanions modulate the properties of both synthetic and biological macromolecules. Although intensely studied for decades the interplay of many length scales has prevented a complete…

Soft Condensed Matter · Physics 2011-03-11 Ngo Minh Toan , Bae-Yeun Ha , D. Thirumalai

We consider polymers formed from a (quenched) random sequence of charged monomers of opposite signs. Such polymers, known as polyampholytes (PAs), are compact when completely neutral and expanded when highly charged. We examine the…

Condensed Matter · Physics 2009-10-22 Yacov Kantor , Mehran Kardar

It is widely held that the Random Energy Model (REM) describes the freezing transition of a variety of types of heteropolymers. We demonstrate that the hallmark property of REM, statistical independence of the energies of states over…

Condensed Matter · Physics 2009-10-28 Vijay S. Pande , Alexander Yu. Grosberg , Chris Joerg , Toyoichi Tanaka

We provide a theory for the dynamics of collapse of strongly charged polyelectrolytes (PEs) and flexible polyampholytes (PAs) using Langevin equation. After the initial stage, in which counterions condense onto PE, the mechanism of approach…

Soft Condensed Matter · Physics 2009-10-31 Namkyung Lee , D. Thirumalai

Physical mechanisms of the interaction of cold plasmas with organic surfaces are discussed. Trapping of plasma ions by the CH2 groups of polymer surfaces resulting in their electrical charging is treated. Polyethylene surfaces were exposed…

Plasma Physics · Physics 2015-03-10 Edward Bormashenko , Gene Whyman , Victor Multanen , Evgeny Shulzinger , Gilad Chaniel

Random polyampholytes (PAs) contain positively and negatively charged monomers that are distributed randomly along the polymer chain. The interaction between charges is assumed to be given by the Debye-Huckel potential. We show that the…

Statistical Mechanics · Physics 2018-08-15 Himadri S. Samanta , Debayan Chakraborty , D. Thirumalai

We have studied the transition in shape of two dimensional polyampholytes using Monte Carlo simulation. We observe that polymers with randomly charged monomers get into a globular shape at lower temperatures, provided that their total…

Condensed Matter · Physics 2007-05-23 M. R. Ejtehadi , S. Rouhani

We perform an exact enumeration study of polymers formed from a (quenched) random sequence of charged monomers $\pm q_0$. Such polymers, known as polyampholytes, are compact when completely neutral and expanded when highly charged. Our…

Condensed Matter · Physics 2009-10-28 Yacov Kantor , Mehran Kardar

We study a solution of long polyanions (PA) with shorter polycations (PC) and focus on the role of Coulomb interaction. A good example is solutions of DNA and PC which are widely studied for gene therapy. In the solution, each PA attracts…

Soft Condensed Matter · Physics 2025-02-11 Rui Zhang , B. I. Shklovskii

We introduce a polymer model where the transition from swollen to compact configurations is due to interactions between the monomers and the solvent. These interactions are the origin of the effective attractive interactions between…

Statistical Mechanics · Physics 2007-05-23 Paolo De Los Rios , Guido Caldarelli

Mean field replica theory is employed to analyze the freezing transition of random heteropolymers comprised of an arbitrary number ($q$) of types of monomers. Our formalism assumes that interactions are short range and heterogeneity comes…

Condensed Matter · Physics 2009-10-22 Vijay S. Pande , Alexander Yu. Grosberg , Toyoichi Tanaka

We study random heteropolymer chain with gaussian distribution of kinds of monomers. The long-range correlations between kinds of monomers were introduce. The mean-field analysis of such heteropolymer indicates the existence of infinite…

Soft Condensed Matter · Physics 2009-09-25 E. Sh. Mamasakhlisov , V. F. Morozov , M. S. Shahinian

Motivated by a number of realizations of long-range interacting systems, including ultra-cold atomic and molecular gases, we study a neutral plasma with power-law interactions longer-ranged than Coulombic. We find that beyond a crossover…

Statistical Mechanics · Physics 2024-09-26 Leo Radzihovsky , John Toner

The pressure and internal energy of an ultracold plasma in a state of quasi-equilibrium are evaluated using classical molecular dynamics simulations. Coulomb collapse is avoided by modeling electron-ion interactions using an attractive…

Plasma Physics · Physics 2017-04-26 Sanat Kumar Tiwari , Nathaniel R. Shaffer , Scott D. Baalrud

Interplay of Coulomb interaction energy, free ion entropy, and conformational elasticity is a fascinating aspect in polyelectrolytes (PEs). We develop a theory for complexation of two oppositely charged PEs, a process known to be the…

Soft Condensed Matter · Physics 2022-09-15 Soumik Mitra , Arindam Kundagrami

A nonlinear description of the interaction of charged particles penetrating a solid has become of basic importance in the interpretation of a variety of physical phenomena. Here we develop a many-body theoretical approach to the quadratic…

Materials Science · Physics 2009-10-31 T. del Rio Gaztelurrutia , J. M. Pitarke
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