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Biological and biomimetic membranes often contain aggregates of embedded or adsorbed macromolecules. In this article, the indirect interactions of cylindrical objects adhering to a planar membrane are considered theoretically. The adhesion…

Soft Condensed Matter · Physics 2009-11-10 Thomas R. Weikl

The impact of impenetrable obstacles on the energetics and equilibrium structure of strongly repulsive directed polymers is investigated. As a result of the strong interactions, regions of severe polymer depletion and excess are found in…

Soft Condensed Matter · Physics 2013-08-30 Anton Souslov , D. Zeb Rocklin , Paul M. Goldbart

We develop a novel biased Monte-Carlo simulation technique to measure the force-extension curves and the distribution function of the extension of fluctuating filaments stretched by external force. The method is applicable for arbitrary…

Soft Condensed Matter · Physics 2007-05-23 David A. Kessler , Yitzhak Rabin

Solid interfaces have intrinsic elasticity. However, in most experiments, this is obscured by bulk stresses. Through microscopic observations of the contact-line geometry of a partially wetting droplet on an anisotropically stretched…

Soft Condensed Matter · Physics 2017-11-29 Qin Xu , Robert W. Style , Eric R. Dufresne

Semi-flexible manifolds such as fluid membranes or semi-flexible polymers undergo delocalization transitions if they are subject to attractive interactions. We study manifolds with short-ranged interactions by field-theoretic methods based…

Soft Condensed Matter · Physics 2007-05-23 Ralf Bundschuh , Michael Lassig

We review recent computer simulation studies of undulating lipid bilayers. Theoretical interpretations of such fluctuating membranes are most commonly based on generalized Helfrich-type elastic models, with additional contributions of local…

Biological Physics · Physics 2013-09-03 Friederike Schmid

The conformations and dynamics of semiflexible filaments subject to a homogeneous external (gravitational) field, e.g., in a centrifuge, are studied numerically and analytically. The competition between hydrodynamic drag and bending…

Biological Physics · Physics 2016-08-23 G. Saggiorato , J. Elgeti , R. G. Winkler , G. Gompper

The flow behavior of a semiflexible polymer in microchannels is studied using Multiparticle Collision Dynamics (MPC), a particle-based hydrodynamic simulation technique. Conformations, distributions, and radial cross-streamline migration…

Soft Condensed Matter · Physics 2015-05-19 Raghunath Chelakkot , Roland G. Winkler , Gerhard Gompper

The conformational properties of flexible and semiflexible polymers exposed to active noise are studied theoretically. The noise may originate from the interaction of the polymer with surround- ing active (Brownian) particles or from the…

Soft Condensed Matter · Physics 2024-06-03 Thomas Eisenstecken , Gerhard Gompper , Roland G. Winkler

Interactions mediated by the cell membrane between inclusions, such as membrane proteins or antimicrobial peptides, play important roles in their biological activity. They also constitute a fascinating challenge for physicists, since they…

Biological Physics · Physics 2019-03-15 Anne-Florence Bitbol , Doru Constantin , Jean-Baptiste Fournier

Fluctuation electromagnetic interaction between a small rotating particle and a polarizable surface produces the friction torque on the particle, changes the attraction force (van -der -Waals force) and the rate of heat exchange in this…

Other Condensed Matter · Physics 2012-09-11 A. A. Kyasov , G. V. Dedkov

Here, we provide an overview of theoretical approaches to semiflexible polymers and their networks. Such semiflexible polymers have large bending rigidities that can compete with the entropic tendency of a chain to crumple up into a random…

Soft Condensed Matter · Physics 2016-05-25 Chase P. Broedersz , Fred. C. MacKintosh

Fluctuations exist in any material object $A$. If $A$ has non-zero temperature $T$, one speaks about thermal fluctuations. If $A$ is at very low $T$, the fluctuations are of quantum origin. Interesting effects appear if two bodies $A$ and…

Statistical Mechanics · Physics 2025-09-30 Daniel Dantchev , Nicholay Tonchev

The fracture and severing of polymer chains plays a critical role in the failure of fibrous materials and the regulated turnover of intracellular filaments. Using continuum wormlike chain models, we investigate the fracture of semiflexible…

Statistical Mechanics · Physics 2020-03-05 Alexander Lorenzo , Enrique M. De La Cruz , Elena F. Koslover

We investigate the effect of quenched surface disorder on effective interactions between two planar surfaces immersed in fluids which are near criticality and belong to the Ising bulk universality class. We consider the case that, in the…

Statistical Mechanics · Physics 2017-12-06 A. Maciolek , O. Vasilyev , V. Dotsenko , S. Dietrich

We investigate the effective long-range interactions between intruder particles immersed in a randomly driven granular fluid. The effective Casimir-like force between two intruders, induced by the fluctuations of the hydrodynamic fields,…

Soft Condensed Matter · Physics 2013-12-04 M. Reza Shaebani , Jalal Sarabadani , Dietrich E. Wolf

We study the translocation of a semiflexible polymer through extended pores with patterned stickiness, using Langevin dynamics simulations. We find that the consequence of pore patterning on the translocation time dynamics is dramatic and…

Soft Condensed Matter · Physics 2018-05-02 Rajneesh Kumar , Abhishek Chaudhuri , Rajeev Kapri

We investigate the folding and forced-unbinding transitions of adsorbed semiflexible polymer chains using theory and simulations. These processes describe biologically relevant phenomena that include adhesive interactions between proteins…

Soft Condensed Matter · Physics 2007-05-23 V. Barsegov , D. Thirumalai

We study the thermodynamic properties of a semiflexible polymer confined inside strips of widths L<=9 defined on a square lattice. The polymer is modeled as a self-avoiding walk and a short range interaction between the monomers and the…

Statistical Mechanics · Physics 2007-05-23 Jurgen F. Stilck

We study a model of a semiflexible long chain polymer confined to a two-dimensional slit of width $w$, and interacting with the walls of the slit. The interactions with the walls are controlled by Boltzmann weights $a$ and $b$, and the…

Statistical Mechanics · Physics 2019-12-03 Nicholas R. Beaton , Leo Li , Jonathon Liu , Thomas Wong
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