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Related papers: Collapse of Randomly Linked Polymers

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In a number of experimental situations, single polymer molecules can be suspended in a vacuum. Here collisions between such molecules are considered. The limit of high collision velocity is investigated numerically for a variety of…

Soft Condensed Matter · Physics 2015-05-19 J. M. Deutsch

A number of recent experiments have provided detailed observations of the configurations of long DNA strands under nano-to-micrometer sized confinement. We therefore revisit the problem of an excluded volume polymer chain confined between…

Soft Condensed Matter · Physics 2011-03-23 Debasish Chaudhuri , Bela Mulder

We consider how beads can diffuse along a chain that wraps them, without becoming displaced from the chain; our proposed mechanism is analogous to the reptation of "stored length" in more familiar situations of polymer dynamics. The problem…

Soft Condensed Matter · Physics 2009-11-07 H. Schiessel , J. Widom , R. F. Bruinsma , W. M. Gelbart

The correlation of gaps in dimer systems was introduced in 1963 by Fisher and Stephenson, who looked at the interaction of two monomers generated by the rigid exclusion of dimers on the closely packed square lattice. In previous work we…

Combinatorics · Mathematics 2012-02-07 Mihai Ciucu

We study a single statistical amphiphilic copolymer chain AB in a selective solvent (e.g.water). Two situations are considered. In the annealed case, hydrophilic (A) and hydrophobic (B) monomers are at local chemical equilibrium and both…

Condensed Matter · Physics 2009-10-22 T. Garel , L. Leibler , H. Orland

We present a new simulation technique to study systems of polymers functionalized by reactive sites that bind/unbind forming reversible linkages. Functionalized polymers feature self-assembly and responsive properties that are unmatched by…

Soft Condensed Matter · Physics 2018-04-18 Bernardo Oyarzún , Bortolo Matteo Mognetti

We perform an exact enumeration study of polymers formed from a (quenched) random sequence of charged monomers $\pm q_0$, restricted to a 2-dimensional square lattice. Monomers interact via a logarithmic (Coulomb) interaction. We study the…

Soft Condensed Matter · Physics 2009-10-30 Eilon Brenner , Yacov Kantor

A polymer folding model on the square lattice is constructed with attractive contact interactions of strength 1/c^2, 0<c<1. The corresponding model on a dynamical random lattice, with freely fluctuating co-ordination number at each vertex,…

Condensed Matter · Physics 2016-08-31 S. Dalley

We consider quantum particle or Gaussian polymer confinement between two surfaces and in cylinders with sinusoidal undulations. In terms of the variational method, we show that the quantum mechanical wave equations have lower ground state…

Soft Condensed Matter · Physics 2009-10-31 Tomonari Dotera , Yasuo Y. Suzuki

While Flory theories provide an extremely useful framework for understanding the behavior of interacting, randomly branching polymers, the approach is inherently limited. Here we use a combination of scaling arguments and computer…

Statistical Mechanics · Physics 2017-01-18 Angelo Rosa , Ralf Everaers

We use large scale Monte Carlo simulations to test scaling theories for the electrostatic persistence length $l_e$ of isolated, uniformly charged polymers with \DH intrachain interactions in the limit where the screening length…

Soft Condensed Matter · Physics 2009-11-07 R. Everaers , A. Milchev , V. Yamakov

We study the relaxation dynamics of a coarse-grained polymer chain at different degrees of stretching by both analytical means and numerical simulations. The macromolecule is modelled as a string of beads, connected by anharmonic springs,…

Soft Condensed Matter · Physics 2009-11-13 M. Febbo , A. Milchev , V. Rostiashvili , T. A. Vilgis , D. Dimitrov

Recent experimental results suggest that the E. coli chromosome feels a self-attracting interaction of osmotic origin, and is condensed in foci by bridging interactions. Motivated by these findings, we explore a generic modeling framework…

Soft Condensed Matter · Physics 2014-12-09 Vittore F. Scolari , Marco Cosentino Lagomarsino

The interplay of topological constraints, excluded volume interactions, persistence length and dynamical entanglement length in solutions and melts of linear chains and ring polymers is investigated by means of kinetic Monte Carlo…

Statistical Mechanics · Physics 2009-10-31 M. Mueller , J. P. Wittmer , J. -L. Barrat

We analyze the freezing and collapse transition of a simple model for flexible polymer chains on simple cubic and face-centered cubic lattices by means of sophisticated chain-growth methods. In contrast to bond-fluctuation polymer models in…

Soft Condensed Matter · Physics 2009-02-16 Thomas Vogel , Michael Bachmann , Wolfhard Janke

We develop a new quantitative molecular theory of liquid-phase dipolar polymer gels. We model monomer units of the polymer network as a couple of charged sites separated by a fluctuating distance. For the first time, within the random phase…

Soft Condensed Matter · Physics 2021-03-09 Yury A. Budkov , Nikolai N. Kalikin , Andrei L. Kolesnikov

We study the conformation and dynamics of a single polymer chain that is pulled by a constant force applied at its one end with the other end free. Such a situation is relevant to the growing technology of manipulating individual…

Soft Condensed Matter · Physics 2015-06-04 Takahiro Sakaue , Takuya Saito , Hirofumi Wada

We investigate numerically the dynamical behaviour of a polymer chain collapsing in a dilute solution. The rate of collapse is measured with and without the presence of hydrodynamic interactions. We find that hydrodynamic interactions both…

Soft Condensed Matter · Physics 2009-11-07 N. Kikuchi , A. Gent , J. M. Yeomans

We study a single flexible chain molecule grafted to a membrane which has pores of size slightly larger than the monomer size. On both sides of the membrane there is the same solvent. When this solvent is good, i.e. when the polymer is…

Soft Condensed Matter · Physics 2015-06-25 Hsiao-Ping Hsu , Peter Grassberger

We present a computer simulation of entangled polymer solutions at equilibrium. The chains repel each other via a soft Gaussian potential, appropriate for semi-dilute solutions at the scale of a correlation blob. The key innovation to…

Computational Physics · Physics 2017-01-10 Airidas Korolkovas , Philipp Gutfreund , Jean-Louis Barrat
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