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The classical method of determining the atomic structure of complex molecules by analyzing diffraction patterns is currently undergoing drastic developments. Modern techniques for producing extremely bright and coherent X-ray lasers allow a…

Biomolecules · Quantitative Biology 2015-10-12 Tomas Ekeberg , Stefan Engblom , Jing Liu

We conduct numerical experiments to investigate the spatial clustering of particles and bubbles in simulations of homogeneous and isotropic turbulence. Varying the Stokes parameter and the densities, striking differences in the clustering…

Chaotic Dynamics · Physics 2015-05-13 Enrico Calzavarini , Martin Kerscher , Detlef Lohse , Federico Toschi

The widely applied density peak clustering (DPC) algorithm makes an intuitive cluster formation assumption that cluster centers are often surrounded by data points with lower local density and far away from other data points with higher…

Machine Learning · Computer Science 2022-01-04 Yizhang Wang , Di Wang , You Zhou , Xiaofeng Zhang , Chai Quek

VARCLUST algorithm is proposed for clustering variables under the assumption that variables in a given cluster are linear combinations of a small number of hidden latent variables, corrupted by the random noise. The entire clustering task…

A parallel algorithm for ``diffusion-limited aggregation'' (DLA) is described and analyzed from the perspective of computational complexity. The dynamic exponent z of the algorithm is defined with respect to the probabilistic parallel…

comp-gas · Physics 2016-08-31 K. Moriarty , J. Machta , R. Greenlaw

As one type of efficient unsupervised learning methods, clustering algorithms have been widely used in data mining and knowledge discovery with noticeable advantages. However, clustering algorithms based on density peak have limited…

Machine Learning · Computer Science 2019-11-26 Jianguo Chen , Philip S. Yu

When considering DLA on a cylinder it is natural to ask how many particles it takes to clog the cylinder, e.g. modeling clogging of arteries. In this note we formulate a very simple DLA clogging model and establish an exponential lower…

Probability · Mathematics 2009-11-13 Itai Benjamini , Christopher Hoffman

Clustering techniques are very attractive for extracting and identifying patterns in datasets. However, their application to very large spatial datasets presents numerous challenges such as high-dimensionality data, heterogeneity, and high…

Databases · Computer Science 2018-02-27 Malika Bendechache , Nhien-An Le-Khac , M-Tahar Kechadi

We develop a new density-based clustering algorithm named CRAD which is based on a new neighbor searching function with a robust data depth as the dissimilarity measure. Our experiments prove that the new CRAD is highly competitive at…

Computation · Statistics 2019-04-09 Xin Huang , Yulia R. Gel

The fractal structure of spin clusters and their boundaries in the critical two-dimensional (2D) Ising model is investigated numerically. The fractal dimensions of these geometrical objects are estimated by means of Monte Carlo simulations…

Statistical Mechanics · Physics 2009-11-10 Wolfhard Janke , Adriaan M. J. Schakel

Clustering is an important phenomenon in turbulent flows laden with inertial particles. Although this process has been studied extensively, there are still open questions about both the fundamental physics and the reconciliation of…

Soft Condensed Matter · Physics 2025-10-09 Daniel Odens Mora , Alberto Aliseda , Alain Cartellier , Martin Obligado

A multilayered particle is illuminated by plane acoustic or electromagnetic waves of one or several frequencies. We consider the inverse scattering problem for the identification of the layers and of the refraction coefficients of the…

Mathematical Physics · Physics 2016-09-07 Semion Gutman

In complex plasmas, the behavior of freely floating micrometer sized particles is studied. The particles can be directly visualized and recorded by digital video cameras. To analyze the dynamics of single particles, reliable algorithms are…

Plasma Physics · Physics 2018-02-14 Daniel P. Mohr , Christina A. Knapek , Peter Huber , Erich Zaehringer

We investigate the formation of cluster crystals with multiply occupied lattice sites on a spherical surface in systems of ultra-soft particles interacting via repulsive, bounded pair potentials. Not all interactions of this kind lead to…

Soft Condensed Matter · Physics 2018-07-31 Stefano Franzini , Luciano Reatto , Davide Pini

We investigate chemical abundance variations along the sightlines through 13 damped Lya systems (DLA). We introduce a technique designed to identify abundance variations in multiple velocity bins along the sightlines and perform a series of…

Astrophysics · Physics 2009-11-07 Jason X. Prochaska

Internal DLA is a discrete random growth model describing growing clusters of particles. Its limiting shape and fluctuations are well understood when the underlying graph is the $d$-dimensional lattice or the cylinder $\mathbb{Z}_N \times…

Probability · Mathematics 2026-04-24 Ahmed Bou-Rabee , Vittoria Silvestri , Ariel Yadin

We consider the internal diffusion limited aggregation (IDLA) process on the infinite cluster in supercritical Bernoulli bond percolation on Euclidean lattices. It is shown that the process on the cluster behaves like it does on the…

Probability · Mathematics 2010-05-25 Eric Shellef

Static structure factors are computed for large-scale, mechanically stable, jammed packings of frictionless spheres (three dimensions) and disks (two dimensions) with broad, power-law size dispersity characterized by the exponent $-\beta$.…

Soft Condensed Matter · Physics 2023-09-06 Joseph M. Monti , Ishan Srivastava , Leonardo E. Silbert , Jeremy B. Lechman , Gary S. Grest

The caustic technique measures the mass of galaxy clusters in both their virial and infall regions and, as a byproduct, yields the list of cluster galaxy members. Here we use 100 galaxy clusters with mass M200>=1E14 Msun/h extracted from a…

Cosmology and Nongalactic Astrophysics · Physics 2013-06-12 Ana Laura Serra , Antonaldo Diaferio

We performed a rigorous theoretical convergence analysis of the discrete dipole approximation (DDA). We prove that errors in any measured quantity are bounded by a sum of a linear and quadratic term in the size of a dipole d, when the…

Optics · Physics 2022-03-31 Maxim A. Yurkin , Valeri P. Maltsev , Alfons G. Hoekstra