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Related papers: Multi shocks in Reaction-diffusion models

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Stochastic modeling of reaction-diffusion kinetics has emerged as a powerful theoretical tool in the study of biochemical reaction networks. Two frequently employed models are the particle-tracking Smoluchowski framework and the on-lattice…

Numerical Analysis · Mathematics 2012-04-27 Stefan Hellander , Andreas Hellander , Linda Petzold

Many physical systems are described by probability distributions that evolve in both time and space. Modeling these systems is often challenging to due large state space and analytically intractable or computationally expensive dynamics. To…

Biological Physics · Physics 2019-07-03 Oliver K. Ernst , Tom Bartol , Terrence Sejnowski , Eric Mjolsness

Reaction dynamics involving subdiffusive species is an interesting topic with only few known results, especially when the motion of different species is characterized by different anomalous diffusion exponents. Here we study the reaction…

Soft Condensed Matter · Physics 2009-11-11 S. B. Yuste , Katja Lindenberg

The result of 2-dimensional Gaussian lattice fit to a speckle intensity pattern based on a linear model that includes nearest-neighbor interactions is presented. We also include a Monte Carlo simulation of the same spatial speckle pattern…

Optics · Physics 2012-11-13 John R. Smith , J. J. Llovera-Gonzalez , Stephen P. Smith

A spatial avalanche model is introduced, in which avalanches increase stability in the regions where they occur. Instability is driven globally by a driving process that contains shocks. The system is typically subcritical, but the shocks…

Adaptation and Self-Organizing Systems · Physics 2015-06-16 James Burridge

We study particle hopping on a two-leg ladder where a particle can jump to their immediate neighbours, one at a time, with rates that depend on the occupation of the departure site and a neighbouring site on the other leg. For specific…

Statistical Mechanics · Physics 2021-09-29 Indranil Mukherjee

We compare reaction-diffusion processes of the $A+A\to 0$ type on scale-free networks created with either the configuration model or the uncorrelated configuration model. We show via simulations that except for the difference in the…

Disordered Systems and Neural Networks · Physics 2009-11-11 Lazaros K. Gallos , Panos Argyrakis

Reaction diffusion systems with Turing instability and mass conservation are studied. In such systems, abrupt decays of stripes follow quasi-stationary states in sequence. At steady state, the distance between stripes is much longer than…

Pattern Formation and Solitons · Physics 2009-11-11 Shuji Ishihara , Mikiya Otsuji , Atsushi Mochizuki

We consider a dipolar Bose-Einstein condensate trapped in an array of two-well systems with an arbitrary orientations of the dipoles relative to the system's axis. The system can be built as a chain of local traps sliced into two parallel…

Quantum Gases · Physics 2017-04-05 Zhiwei Fan , Yuhan Shi , Yan Liu , Wei Pang , Yongyao Li , Boris A. Malomed

Prior social contagion models consider the spread of either one contagion at a time on interdependent networks or multiple contagions on single layer networks or under assumptions of competition. We propose a new threshold model for the…

Social and Information Networks · Computer Science 2018-09-13 Ho-Chun Herbert Chang , Feng Fu

We confront, quantitatively, the theoretical description of the reaction-diffusion of a second order reaction to experiment. The reaction at work is \ca/CaGreen, and the reactor is a T-shaped microchannel, 10 $\mu$m deep, 200 $\mu$m wide,…

Fluid Dynamics · Physics 2009-11-07 Charles N. Baroud , Fridolin Okkels , Laure Menetrier , Patrick Tabeling

Reaction--diffusion mechanism are a robust paradigm that can be used to represent many biological and physical phenomena over multiple spatial scales. Applications include intracellular dynamics, the migration of cells and the patterns…

Quantitative Methods · Quantitative Biology 2021-01-01 Cameron A. Smith , Christian A. Yates

We present a linear dispersive partial differential equation which manifests a number of qualitative features of dispersive shocks, typically thought to occur only in nonlinear models. The model captures much of the short time phenomenon…

Analysis of PDEs · Mathematics 2019-08-26 David Smith , Thomas Trogdon , Vishal Vasan

We analyze diffusion of small particles in a solid polymeric medium taking into account a short range particle-polymer interaction. The system is modeled by a particle diffusion on a ternary lattice where the sites occupied by polymer…

Statistical Mechanics · Physics 2015-06-11 Federico Camboni , Andreas Koher , Igor M. Sokolov

We study a lattice model for the spreading of fluid films, which are a few molecular layers thick, in narrow channels with inert lateral walls. We focus on systems connected to two particle reservoirs at different chemical potentials,…

Statistical Mechanics · Physics 2009-11-13 C. Dotti , A. Gambassi , M. N. Popescu , S. Dietrich

We present the results of Monte Carlo simulations of two different 10-state Potts glasses with random nearest neighbor interactions on a simple cubic lattice. In the first model the interactions come from a \pm J distribution and in the…

Statistical Mechanics · Physics 2009-11-07 Claudio Brangian , Walter Kob , Kurt Binder

We present the exact solution for the full dynamics of a nonequilibrium spin chain and its dual reaction-diffusion model, for arbitrary initial conditions. The spin chain is driven out of equilibrium by coupling alternating spins to two…

Statistical Mechanics · Physics 2007-05-23 M. Mobilia , B. Schmittmann , R. K. P. Zia

We study irreversible A-B reaction kinetics at a fixed interface separating two immiscible bulk phases, A and B. We consider general dynamical exponent $z$, where $x_t\sim t^{1/z}$ is the rms diffusion distance after time $t$. At short…

Soft Condensed Matter · Physics 2007-05-23 Ben O'Shaughnessy , Dimitrios Vavylonis

A stochastic reaction-diffusion model is studied on a networked support. In each patch of the network two species are assumed to interact following a non-normal reaction scheme. When the interaction unit is replicated on a directed linear…

It is shown that third-order 1D nonlinear dispersion equations admit single point gradient catastrophe, described by blow-up-type similarity solutions. After blow-up, the solutions admit shock wave-type self-similar extensions. Snce such…

Analysis of PDEs · Mathematics 2009-02-11 V. A. Galaktionov