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We performed a numerical study of the efficiency of mixing by alternating horizontal and vertical shear ``wedge'' flows on the two-dimensional torus. Our results suggest that except in cases where each individual flow is applied for only a…

Analysis of PDEs · Mathematics 2021-11-02 Li-Tien Cheng , Frederick Rajasekaran , Kin Yau James Wong , Andrej Zlatos

Cell spheroids are a widely used model to investigate cell-cell and cell-matrix interactions in a 3D microenvironment in vitro. Most research on cell spheroids has been focused on their response to various stimuli under static conditions.…

Cell Behavior · Quantitative Biology 2024-04-12 Rosalia Ferraro , Jasmin Di Franco , Sergio Caserta , Stefano Guido

Targeted drug delivery relies on two physical processes: the selective binding of a therapeutic particle to receptors on a specific cell membrane, followed by transport of the particle across the membrane. In this article, we address some…

Soft Condensed Matter · Physics 2021-04-16 Simon Merminod , John R. Edison , Huang Fang , Michael F. Hagan , W. Benjamin Rogers

We examine the characteristics of mean flow and scalar concentration characteristics of a turbulent boundary layer flow impinging on a cluster of tall obstacles (which can also be interpreted as a porous obstruction). The cluster is created…

The dynamic behavior of the slip length in a fluid flow confined between atomically smooth surfaces is investigated using molecular dynamics simulations. At weak wall-fluid interactions, the slip length increases nonlinearly with the shear…

Soft Condensed Matter · Physics 2007-10-14 Nikolai V. Priezjev

L-selectin mediated tethers result in leukocyte rolling only above a threshold in shear. Here we present biophysical modeling based on recently published data from flow chamber experiments (Dwir et al., J. Cell Biol. 163: 649-659, 2003)…

Subcellular Processes · Quantitative Biology 2009-11-11 Ulrich S. Schwarz , Ronen Alon

Multiphase shear flows often show banded structures that affect the global behavior of complex fluids e.g. in microdevices. Here we investigate numerically the banding of emulsions, i.e. the formation of regions of high and low volume…

Fluid Dynamics · Physics 2020-04-30 Francesco De Vita , Marco Edoardo Rosti , Sergio Caserta , Luca Brandt

Microfluidic trapping arrays have proven to be efficient tools for various applications that require working at the single-cell level, such as cell-cell communication or fusion. Although several hydrodynamic trapping devices have already…

A theoretical approach has been undertaken in order to model the thermodynamic equilibrium of a vesicle adhering to a flat substrate. The vesicle is treated in a canonical description with a fixed number of sites. A finite number of these…

Soft Condensed Matter · Physics 2009-11-11 Ana-Suncana Smith , Udo Seifert

Cells swimming in confined environments are attracted by surfaces. We measure the steady-state distribution of smooth-swimming bacteria (Escherichia coli) between two glass plates. In agreement with earlier studies, we find a strong…

Soft Condensed Matter · Physics 2008-10-02 Allison P. Berke , Linda Turner , Howard C. Berg , Eric Lauga

We study the rheological behaviour of a dense bidispersed suspension varying the relative size of the two dispersed phases. The main outcome of our analysis is that an enhanced flowability (reduced relative viscosity) of the suspension can…

Soft Condensed Matter · Physics 2023-02-21 Alessandro Monti , Marco Edoardo Rosti

Certain biological reactions, such as receptor-ligand binding at cell-cell interfaces and macromolecules binding to biopolymers, require many smaller molecules crowding a reaction site to be cleared. Examples include the T cell interface, a…

Subcellular Processes · Quantitative Biology 2016-03-30 Jay Newby , Jun Allard

We demonstrate a novel shear-induced mechanism for growth of concentration fluctuations in a bacterial suspension. Using a linear stability analysis, a homogeneously sheared suspension is shown to support exponentially growing layering…

Fluid Dynamics · Physics 2018-08-24 Laxminarsimharao V , Piyush Garg , Ganesh Subramanian

We consider a theoretical model for membranes with adhesive receptors, or stickers, that are actively switched between two conformational states. In their 'on'-state, the stickers bind to ligands in an apposing membrane, whereas they do not…

Soft Condensed Matter · Physics 2007-05-23 Bartosz Rozycki , Reinhard Lipowsky , Thomas R. Weikl

This paper considers a broadly biologically relevant question of a chain (such as a protein) binding to a sequence of receptors with matching multiple ligands distributed along the chain. This binding is critical in cell adhesion events,…

Soft Condensed Matter · Physics 2017-11-29 Samuel Bell , Eugene M. Terentjev

Margination, a fundamental process in which leukocytes migrate from the flowing blood to the vessel wall, is well-documented in physiology. However, it is still an open question on how the differences in cell size and stiffness of white and…

Soft Condensed Matter · Physics 2024-09-05 Revaz D. Chachanidze , Othmane Aouane , Jens Harting , Christian Wagner , Marc Leonetti

We perform direct numerical simulations (DNS) of an advected scalar field which diffuses and reacts according to a nonlinear reaction law. The objective is to study how the bulk burning rate of the reaction is affected by an imposed flow.…

In this paper, we examine the emergence of cell flow induced by a tension gradient on a tissue interface as in the case of the Marangoni flow on liquid interface. We consider the molecule density polarity of the heterophilic adhesion…

Cell Behavior · Quantitative Biology 2022-04-27 Katsuyoshi Matsushita , Hidenori Hashimura , Hidekazu Kuwayama , Koichi Fujimoto

The intricate wobbling motion of flagellated bacteria, characterized by the periodic precession of the cell body, is a determinant factor in their motility and navigation within complex fluid environments. While well-studied in quiescent…

Soft Condensed Matter · Physics 2026-01-26 Wei Feng , Fanglong Dang , Hao Luo , Alan C. H. Tsang , Yanan Liu , Guangyin Jing

Super Hydrophobic (SH) coatings are widely used to mitigate drag in various applications. Numerous studies have demonstrated that the beneficial wall-slip effect produced by these materials disappears in laminar flow regimes. The main…