English
Related papers

Related papers: Finite-size effects in intracellular microrheology

200 papers

Motivated by recent experiments showing the buckling of microtubules in cells, we study theoretically the mechanical response of, and force propagation along elastic filaments embedded in a non-linear elastic medium. We find that, although…

Soft Condensed Matter · Physics 2009-11-13 Moumita Das , Alex J. Levine , F. C. MacKintosh

We investigated the viscoelastic response of model interphase chromosomes by tracking the three-dimensional motion of hundreds of dispersed Brownian particles of sizes ranging from the thickness of the chromatin fiber up to slightly above…

Biomolecules · Quantitative Biology 2015-01-06 Manon Valet , Angelo Rosa

We experimentally investigate the effects of finite-system size on the dynamics of weakly nonlinear random gravity-capillary surface waves. Experiments are conducted in rectangular tanks with varying aspect ratios, in which the fluid…

Fluid Dynamics · Physics 2026-02-10 Tanu Singla , Jean-Baptiste Gorce , Eric Falcon

Many practically relevant materials combine properties of viscous fluids and elastic solids to viscoelastic behavior. Our focus is on the induced dynamic behavior of damped finite-sized particulate inclusions in such substances. We…

Soft Condensed Matter · Physics 2019-01-04 Mate Puljiz , Andreas M. Menzel

In this work, we investigate the dynamics of the number density fluctuations of a dilute suspension of active particles in a linear viscoelastic fluid. We propose a model for the frequency-dependent diffusion coefficient of the active…

Soft Condensed Matter · Physics 2022-11-08 Juan Ruben Gomez-Solano , Rosalio F. Rodriguez , Elizabeth Salinas-Rodriguez

The eukaryotic cell's cytoskeleton is a prototypical example of an active material: objects embedded within it are driven by molecular motors acting on the cytoskeleton, leading to anomalous diffusive behavior. Experiments tracking the…

Soft Condensed Matter · Physics 2021-11-12 Daniel W. Swartz , Brian A. Camley

Cytoplasmic viscoelasticity is crucial for various intracellular processes. However, the dynamic shear modulus, $G(\omega)$, has been reported to vary considerably, often without consistent patterns or rules, even within the same cell.…

Biological Physics · Physics 2025-04-29 H. Ebata , K. Nishizawa , F. A. S. van Esterik , Y. Tao , S. Inokuchi , H. Ise , D. Mizuno

At finite Reynolds numbers, Re, particles migrate across laminar flow streamlines to their equilibrium positions in microchannels. This migration is attributed to a lift force, and the balance between this lift and gravity determines the…

At the macroscopic scale, many important models of collective motion fall into the class of kinematic flows for which both velocity and diffusion terms depend only on particle density. When total particle numbers are fixed and finite,…

Adaptation and Self-Organizing Systems · Physics 2022-04-12 Jeremy Worsfold , Tim Rogers , Paul Milewski

We study the effects of finite-sizeness on small, neutrally buoyant, spherical particles advected by open chaotic flows. We show that, when projected onto configuration space, the advected finite-size particles disperse about the unstable…

Chaotic Dynamics · Physics 2007-05-23 Rafael Dias Vilela , Alessandro P. S. de Moura , Celso Grebogi

We use interface-resolved simulations to study finite-size effects in turbulent channel flow of neutrally-buoyant spheres. Two cases with particle sizes differing by a factor of 2, at the same solid volume fraction of 20% and bulk Reynolds…

Fluid Dynamics · Physics 2021-02-23 Pedro Costa , Francesco Picano , Luca Brandt , Wim-Paul Breugem

Most of the intra-cellular events involved in the initiation and propagation phases of this process has now been identified astrocytes. The control of the spread of intracellular calcium signaling has been demonstrated to occur at several…

Cell Behavior · Quantitative Biology 2013-01-08 Brajesh Kumar Jha , Neeru Adlakha , M. N. Mehta

We compare and synthesize the results of two microrheological experiments on the cytoskeleton of single cells. In the first one, the creep function J(t) of a cell stretched between two glass plates is measured after applying a constant…

The scaling of the number of Rydberg excitations in a laser-driven cloud of atoms with the interaction strength is found to be affected by the finite size of the system. The scaling predicted by a theoretical model is compared with results…

Atomic Physics · Physics 2013-10-16 M. Gärttner , K. P. Heeg , T. Gasenzer , J. Evers

We present the results of a molecular dynamics computer simulation in which we investigate the dynamics of silica. By considering different system sizes, we show that in simulations of the dynamics of this strong glass former surprisingly…

Statistical Mechanics · Physics 2009-10-28 J. Horbach , W. Kob , K. Binder , C. A. Angell

Inferring properties of macroscopic solutions from molecular simulations is complicated by the limited size of systems that can be feasibly examined with a computer. When long-ranged electrostatic interactions are involved, the resulting…

Statistical Mechanics · Physics 2018-08-14 Stephen J. Cox , Phillip L. Geissler

The manipulation and control of microparticles through non-intrusive methods is pivotal in biomedical applications such as cell sorting and cell focusing. Although several experimental and numerical studies have been dedicated to single…

Fluid Dynamics · Physics 2023-12-20 Giancarlo Esposito , Gaetano D'Avino , Massimiliano Maria Villone

We study the Brownian motion of microbeads immersed in water and in a viscoelastic wormlike micelles solution by optical trapping interferometry and diffusing wave spectroscopy. Through the mean-square displacement obtained from both…

Diffusion is the macroscopic manifestation of disordered molecular motion. Mathematically, diffusion equations are partial differential equations describing the fluid-like large-scale dynamics of parcels of molecules. Spatially…

Fluid Dynamics · Physics 2018-10-26 F. Sattin , A. Bonato , L. Salasnich

We study finite size effects in a family of systems in which a parameter controls interaction-range. In the long-range regime where the infinite-size free energy is universal, we show that the finite size effects are not universal but…

Statistical Mechanics · Physics 2009-11-11 Shin-itiro Goto , Yoshiyuki Y. Yamaguchi