Related papers: Numerical study on a disordered model for DNA dena…
We predict a novel temperature-driven phase transition of DNA below the melting transition. The additional, intermediate phase exists for repetitive sequences, when the two strands have different lengths. In this phase, the excess bases of…
We consider the patterns of collective motion emerging when many aligning, self-propelling units move in two dimensions while interacting through a repulsive potential and are also subject to delays and random perturbations. In this…
We find conditions required to achieve complete population transfer, via coherent population trapping, from an initial state to a designated final state at a designated time in a degenerate $n$-state atom, where transitions are caused by an…
We study the nature of the dynamics in a first-order quantum phase transition between spherical and prolate-deformed nuclear shapes. Classical and quantum analyses reveal a change in the system from a chaotic H\'enon-Heiles behavior on the…
We investigate approximate emergent nonabelian symmetry in a class of weakly first order `deconfined' phase transitions using Monte Carlo simulations and a renormalization group analysis. We study a transition in a 3D classical loop model…
Motivated by the experimental observation [1] that driving a non-interacting Bose gas in a 3D box with weak disorder leads to power-law energy growth, $E \propto t^{\eta}$ with $\eta=0.46(2)$, and compressed-exponential momentum…
We study by extensive Monte Carlo simulations the effect of random bond dilution on the phase transition of the three-dimensional 4-state Potts model which is known to exhibit a strong first-order transition in the pure case. The phase…
Femtosecond time-resolved X-ray diffraction is used to study a photo-induced phase transition between two charge density wave (CDW) states in 1T-TaS$_2$, namely the nearly commensurate (NC) and the incommensurate (I) CDW states. Structural…
We present a comprehensive analysis of the emerging order and chaos and enduring symmetries, accompanying a generic (high-barrier) first-order quantum phase transition (QPT). The interacting boson model Hamiltonian employed, describes a QPT…
A charge-density wave (CDW) state has a broken symmetry described by a complex order parameter with an amplitude and a phase. The conventional view, based on clean, weak-coupling systems, is that a finite amplitude and long-range phase…
The dynamics of a loop in DNA molecules at the denaturation transition is studied by scaling arguments and numerical simulations. The autocorrelation function of the state of complementary bases (either closed or open) is calculated. The…
We study the effects of disorder on the quantum Hall stripe phases in half-filled high Landau levels using exact numerical diagonalization. We show that, in the presence of weak disorder, a compressible, striped charge density wave, becomes…
We study the role of cations on the stability of double stranded DNA (dsDNA) molecules.It is known that the two strands of double stranded DNA(dsDNA) have negative charge due to phosphate group. Cations in the form of salt in the solution,…
This paper consists of two important theoretical observations on the interplay between l = 2 condensates; d-density wave (ddw), electronic nematic and d-wave superconducting states. (1) There is SO(4) invariance at a transition between the…
The two strands of a DNA molecule with a repetitive sequence can pair into many different basepairing patterns. For perfectly periodic sequences, early bulk experiments of Poerschke indicate the existence of a sliding process, permitting…
DNA-functionalized particles have great potential for the design of complex self-assembled materials. The major hurdle in realizing crystal structures from DNA-functionalized particles is expected to be kinetic barriers that trap the system…
First order quantum phase transition (QPT) between spherical and axially deformed nuclei shows coexisting, but well-separated regions of regular and chaotic dynamics. We employ a Hamiltonian of the Arima-Iachello Interacting Boson Model…
We use the density matrix renormalization group to study the quantum transitions that occur in the half-filled one-dimensional fermionic Hubbard model with onsite potential disorder. We find a transition from the gapped Mott phase with…
In this paper we treat some fractal and statistical features of the DNA sequences. First, a fractal record model of DNA sequence is proposed by mapping DNA sequences to integer sequences, followed by R/S analysis of the model and…
We use quantum Monte Carlo simulations to study effects of disorder on the quantum phase transition occurring versus the ratio g=J/J' in square-lattice dimerized S=1/2 Heisenberg antiferromagnets with intra- and inter-dimer couplings J and…