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A stochastic model is used to assess the effect of external parameters on the development of submerged biofilms on smooth and rough surfaces. The model includes basic cellular mechanisms, such as division and spreading, together with an…

Soft Condensed Matter · Physics 2024-01-17 David Rodriguez , Baldvin Einarsson , Ana Carpio

The interplay of quantum fluctuations with nonlinear dynamics is a central topic in the study of open quantum systems, connected to fundamental issues (such as decoherence and the quantum-classical transition) and practical applications…

Quantum Physics · Physics 2009-11-13 Michael A. Armen , Hideo Mabuchi

Quantum many-body scars have been put forward as counterexamples to the Eigenstate Thermalization Hypothesis. These atypical states are observed in a range of correlated models as long-lived oscillations of local observables in quench…

Statistical Mechanics · Physics 2021-10-13 Hongzheng Zhao , Adam Smith , Florian Mintert , Johannes Knolle

Metamodeling of complex numerical systems has recently attracted the interest of the mathematical programming community. Despite the progress in high performance computing, simulations remain costly, as a matter of fact, the assessment of…

Other Statistics · Statistics 2018-11-13 Soumaya Azzi , Yuanyuan Huang , Bruno Sudret , Joe Wiart

It is well-known that the microstructure of electrodes in lithium-ion batteries strongly affects their performance. Vice versa, the microstructure can exhibit strong changes during the usage of the battery due to aging effects. For a better…

Materials Science · Physics 2018-01-15 Klaus Kuchler , Daniel Westhoff , Julian Feinauer , Tim Mitsch , Ingo Manke , Volker Schmidt

Contact between fluctuating, fluid-lubricated soft surfaces is prevalent in engineering and biological systems, a process starting with adhesive contact, which can give rise to complex coarsening dynamics. One representation of such a…

Soft Condensed Matter · Physics 2026-01-14 Vira Dhaliwal , Jingbang Liu , Andreas Carlson

Reliable forward uncertainty quantification in engineering requires methods that account for aleatory and epistemic uncertainties. In many applications, epistemic effects arising from uncertain parameters and model form dominate prediction…

Computational Engineering, Finance, and Science · Computer Science 2025-12-18 Akash Yadav , Ruda Zhang

Many imaging techniques for biological systems -- like fixation of cells coupled with fluorescence microscopy -- provide sharp spatial resolution in reporting locations of individuals at a single moment in time but also destroy the dynamics…

Subcellular Processes · Quantitative Biology 2024-05-15 Christopher E. Miles , Scott A. McKinley , Fangyuan Ding , Richard B. Lehoucq

What is aging? Mechanistic answers to this question remain elusive despite decades of research. Here, we propose a mathematical model of cellular aging based on a model gene interaction network. Our network model is made of only non-aging…

Molecular Networks · Quantitative Biology 2023-09-12 Hong Qin

Stochastic processes have found numerous applications in science, as they are broadly used to model a variety of natural phenomena. Due to their intrinsic randomness and uncertainty, they are, however, difficult to characterize. Here, we…

We propose a new theory for aging based on dynamical systems and provide a data-driven computational method to quantify the changes at the cellular level. We use ergodic theory to decompose the dynamics of changes during aging and show that…

Quantitative Methods · Quantitative Biology 2025-04-18 Farhan Khodaee , Rohola Zandie , Yufan Xia , Elazer R. Edelman

We investigate the low-temperature dynamics of a simple stochastic model, introduced recently in the context of the physics of glasses. The slowest characteristic time at equilibrium diverges exponentially at low temperature. On smaller…

Statistical Mechanics · Physics 2009-10-30 C Godreche , J M Luck

Aging, the process of growing old or maturing, is one of the most widely seen natural phenomena in the world. For the stochastic processes, sometimes the influence of aging can not be ignored. For example, in this paper, by analyzing the…

Chemical Physics · Physics 2017-11-30 Wanli Wang , Weihua Deng

The notion of periodic two-scale convergence and the method of periodic unfolding are prominent and useful tools in multiscale modeling and analysis of PDEs with rapidly oscillating periodic coefficients. In this paper we are interested in…

Analysis of PDEs · Mathematics 2021-05-28 Martin Heida , Stefan Neukamm , Mario Varga

In stochastic modeling, the excess entropy -- the mutual information shared between a process's past and future -- represents the fundamental lower bound of the memory needed to simulate its dynamics. However, this bound cannot be saturated…

Quantum Physics · Physics 2026-02-27 Kelvin Onggadinata , Andrew Tanggara , Mile Gu , Dagomir Kaszlikowski

We study the non-equilibrium linear response of quantum elastic systems pinned by quenched disorder with Schwinger-Keldysh real-time techniques complemented by a mean-field variational approach. We find (i) a quasi-equilibrium regime in…

Disordered Systems and Neural Networks · Physics 2007-05-23 L. F. Cugliandolo , T. Giamarchi , P. Le Doussal

Quantum stochastic differential equations have been used to describe the dynamics of an atom interacting with the electromagnetic field via absorption/emission processes. Here, by using the full quantum stochastic Schroedinger equation…

Quantum Physics · Physics 2009-10-31 Alberto Barchielli , Giancarlo Lupieri

It has been shown that contact aging due to chemical reactions in single asperity contacts can have a significant effect on friction. However, it is currently unknown how chemically-induced contact aging of friction depends on roughness…

Materials Science · Physics 2018-08-03 Zhuohan Li , Lars Pastewka , Izabela Szlufarska

Using molecular dynamics computer simulations we investigate the aging dynamics of a gel. We start from a fractal structure generated by the DLCA-DEF algorithm, onto which we then impose an interaction potential consisting of a short-range…

Soft Condensed Matter · Physics 2008-12-19 M-A. Suarez , N. Kern , E. Pitard , W. Kob

We discuss the interplay between the degree of dynamical stochasticity, memory persistence and violation of the self-averaging property in the aging kinetics of quenched ferromagnets. We show that, in general, the longest possible memory…

Statistical Mechanics · Physics 2020-08-26 Federico Corberi , Eugenio Lippiello , Paolo Politi