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We examine the effects of preferential attachment on a model of competing clusters. In the original model, cluster masses grow at the expense of their neighbours; on a lattice, this is known to result in the asymptotic survival and…

Physics and Society · Physics 2014-12-16 Suman Aich , Anita Mehta

We investigate, using numerical simulations and analytical arguments, a simple one dimensional model for the swelling or the collapse of a closed polymer chain of size N, representing the dynamical evolution of a polymer in a \Theta-solvent…

Condensed Matter · Physics 2009-10-31 E. Pitard , J. -P. Bouchaud

Collective and directed motility or swarming is an emergent phenomenon displayed by many self-organized assemblies of active biological matter such as clusters of embryonic cells during tissue development, cancerous cells during tumor…

Biological Physics · Physics 2016-04-05 Katherine Copenhagen , Ajay Gopinathan

Most generative models for clustering implicitly assume that the number of data points in each cluster grows linearly with the total number of data points. Finite mixture models, Dirichlet process mixture models, and Pitman--Yor process…

Methodology · Statistics 2015-12-03 Jeffrey Miller , Brenda Betancourt , Abbas Zaidi , Hanna Wallach , Rebecca C. Steorts

We consider a continuum version of a previously introduced and numerically studied model of macroevolution (PRL 75, 2055, (1995)) in which agents evolve by an optimization process in a rugged fitness landscape and die due to their…

Biological Physics · Physics 2009-10-30 Paolo Sibani

The dynamical evolution of many economic, sociological, biological and physical systems tends to be dominated by a relatively small number of unexpected, large changes (`extreme events'). We study the large, internal changes produced in a…

Disordered Systems and Neural Networks · Physics 2009-11-07 D. Lamper , S. Howison , N. F. Johnson

Electrical resistivity evolution during precipitation in Al-Sc alloys is modeled using cluster dynamics. This mesoscopic modeling has already been shown to correctly predict the time evolution of the precipitate size distribution. In this…

Materials Science · Physics 2007-05-23 Emmanuel Clouet , Alain Barbu

We present large-scale molecular dynamics simulations to study the free evolution of granular gases. Initially, the density of particles is homogeneous and the velocity follows a Maxwell-Boltzmann (MB) distribution. The system cools down…

Statistical Mechanics · Physics 2016-09-21 Prasenjit Das , Sanjay Puri , Moshe Schwartz

In the last years the Prisoner Dilemma (PD) has become a paradigm for the study of the emergence of cooperation in spatially structured populations. Such structure is usually assumed to be given by a graph. In general, the success of…

Adaptation and Self-Organizing Systems · Physics 2011-03-28 M. N. Kuperman , S. Risau-Gusman

We discuss the population dynamics with selection and random diffusion, keeping the total population constant, in a fitness landscape associated with Constraint Satisfaction, a paradigm for difficult optimization problems. We obtain a phase…

Populations and Evolution · Quantitative Biology 2016-11-23 Tommaso Brotto , Guy Bunin , Jorge Kurchan

Game theory ideas provide a useful framework for studying evolutionary dynamics in a well-mixed environment. This approach, however, typically enforces a strictly fixed overall population size, deemphasizing natural growth processes. We…

Populations and Evolution · Quantitative Biology 2016-08-30 Thiparat Chotibut , David R. Nelson

We investigate an extremal dynamics model of evolution with a variable number of units. Due to addition and removal of the units, the topology of the network evolves and the network splits into several clusters. The activity is mostly…

Statistical Mechanics · Physics 2009-10-31 Frantisek Slanina , Miroslav Kotrla

The mass and size distributions are the key characteristics of any astrophysical objects, including the densest clumps comprising the cold phase of multiphase environments. In our recent papers, we showed how individual clouds of various…

Astrophysics of Galaxies · Physics 2019-05-01 Tim Waters , Daniel Proga

Single receptor-ligand bonds have finite lifetimes, so that biological systems can dynamically react to changes in their environment. In cell adhesion, adhesion bonds usually act cooperatively in adhesion clusters. Outside the cellular…

Soft Condensed Matter · Physics 2007-05-23 T. Erdmann , U. S. Schwarz

We present exact and asymptotic results for clusters in the one-dimensional totally asymmetric exclusion process (TASEP) with two different dynamics. The expected length of the largest cluster is shown to diverge logarithmically with…

Statistical Mechanics · Physics 2009-11-07 O. Pulkkinen , J. Merikoski

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

Statistical Mechanics · Physics 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

Evolutionary game theory has impacted many fields of research by providing a mathematical framework for studying the evolution and maintenance of social and moral behaviors. This success is owed in large part to the demonstration that the…

Physics and Society · Physics 2024-06-03 José F. Fontanari

We present molecular dynamics (MD) simulations results for dense fluids of ultrasoft, fully-penetrable particles. These are a binary mixture and a polydisperse system of particles interacting via the generalized exponential model, which is…

Soft Condensed Matter · Physics 2012-12-24 Daniele Coslovich , Marco Bernabei , Angel J. Moreno

Using the APM cluster distribution we find interesting alignment effects: (1) Cluster substructure is strongly correlated with the tendency of clusters to be aligned with their nearest neighbour and in general with the nearby clusters that…

Astrophysics · Physics 2017-01-25 Manolis Plionis

We study the competition between interactions and disorder in two dimensions. Whereas a noninteracting system is always Anderson localized by disorder in two dimensions, a pure system can develop a Mott gap for sufficiently strong…

Strongly Correlated Electrons · Physics 2009-03-05 David J. Schwab , Sudip Chakravarty
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