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Related papers: Semiflexible polymers in a random environment

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We consider a general model of a heterogeneous polymer chain fluctuating in the proximity of an interface between two selective solvents. The heterogeneous character of the model comes from the fact that the monomer units interact with the…

Probability · Mathematics 2009-09-29 Francesco Caravenna , Giambattista Giacomin , Lorenzo Zambotti

Semiflexible polymer models are widely used as a paradigm to understand structural phases in biomolecules including folding of proteins. Since stable knots are not so common in real proteins, the existence of stable knots in semiflexible…

Soft Condensed Matter · Physics 2021-07-14 Suman Majumder , Martin Marenz , Subhajit Paul , Wolfhard Janke

The tumbling dynamics of individual polymers in semidilute solution is studied by large-scale non-equilibrium mesoscale hydrodynamic simulations. We find that the tumbling time is equal to the non-equilibrium relaxation time of the polymer…

Soft Condensed Matter · Physics 2011-03-21 C. -C. Huang , G. Sutmann , G. Gompper , R. G. Winkler

Using the supersymmetry technique, we study the localization-delocalization transition in quasi-one-dimensional non-Hermitian systems with a direction. In contrast to chains, our model captures the diffusive character of carriers' motion at…

Disordered Systems and Neural Networks · Physics 2009-10-31 A. V. Kolesnikov , K. B. Efetov

We propose a field-theoretical approach to a polymer system immersed in an ideal mixture of clustering centers. The system contains several species of these clustering centers with different functionality, each of which connects a fixed…

Materials Science · Physics 2015-05-28 Riccardo Fantoni , Kristian K. Muller-Nedebock

Quasiperiodic systems serve as fertile ground for studying localisation, due to their propensity already in one dimension to exhibit rich phase diagrams with mobility edges. The deterministic and strongly-correlated nature of the…

Disordered Systems and Neural Networks · Physics 2021-08-11 Alexander Duthie , Sthitadhi Roy , David E. Logan

We develop a unified scaling framework for the end-position distributions of tethered polymers confined in finite cylindrical geometries. Two observables are analysed: the longitudinal distribution P(x), along the confinement axis, and the…

Soft Condensed Matter · Physics 2025-12-16 Bibhatsu Kuiri , Rittwick Mondal , Dipankar Biswas , Soumyajyoti Kabi

We revisit a model of semiflexible Gaussian chains proposed by Winkler \textit{et al}, solve the dynamics of the discrete description of the model and derive exact algebraic expressions for some of the most relevant dynamical observables,…

Soft Condensed Matter · Physics 2022-11-02 Andres R. Tejedor , Jaime R. Tejedor , Jorge Ramirez

We study the Brownian dynamics of flexible and semiflexible polymer chains densely grafted on a flat substrate, upon rapid quenching of the system when the quality of solvent becomes poor and chains attempt collapse into a globular state.…

Soft Condensed Matter · Physics 2015-08-19 Anna Lappala , Saahil Mendiratta , Eugene M. Terentjev

We explore the effect of an attractive interaction between parallel-aligned polymers, which are perpendicularly grafted on a substrate. Such an attractive interaction could be due to, e.g., reversible cross-links. The competition between…

Soft Condensed Matter · Physics 2013-10-08 Panayotis Benetatos , Eugene M. Terentjev , Annette Zippelius

The elasticity of disordered and polydisperse polymer networks is a fundamental problem of soft matter physics that is still open. Here, we self-assemble polymer networks via simulations of a mixture of bivalent and tri- or tetravalent…

We study the localisation of lattice polymer models near a permeable interface in two dimensions. Localisation can arise due to an interaction between the polymer and the interface, and can be altered by a preference for the bulk solvent on…

Statistical Mechanics · Physics 2024-07-24 C J Bradly , N R Beaton , A L Owczarek

The properties of semidilute polymer solutions are investigated at equilibrium and under shear flow by mesoscale simulations, which combine molecular dynamics simulations and the multiparticle collision dynamics approach. In semidilute…

Soft Condensed Matter · Physics 2015-03-19 Chien-Cheng Huang , Roland G. Winkler , Godehard Sutmann , Gerhard Gompper

We present a perturbative approach to disordered systems in one spatial dimension that accesses the full range of phase disorder and clarifies the connection between localization and phase information. We consider a long chain of…

Disordered Systems and Neural Networks · Physics 2024-03-04 Adrian B. Culver , Pratik Sathe , Rahul Roy

We present a theoretical framework for the linear and nonlinear visco-elastic properties of reversibly crosslinked networks of semiflexible polymers. In contrast to affine models where network strain couples to the polymer end-to-end…

Soft Condensed Matter · Physics 2016-07-06 Jan Plagge , Andreas Fischer , Claus Heussinger

Recent developments of microscopic mechanical experiments allow the manipulation of individual polymer molecules in two main ways: \textit{uniform} stretching by external forces and \textit{non-uniform} stretching by external fields. Many…

Biological Physics · Physics 2015-06-11 Fabio Manca , Stefano Giordano , Pier Luca Palla , Fabrizio Cleri , Luciano Colombo

The random-force (Larkin) model of a directed elastic string subject to quenched random forces in the transverse directions has been a paradigm in the statistical physics of disordered systems. In this brief note, we investigate a modified…

Soft Condensed Matter · Physics 2011-08-05 Panayotis Benetatos , Eugene M. Terentjev

Rigid particles pack into structures, such as sand dunes on the beach, whose overall stability is determined by the average number of contacts between particles. However, when packing spatially extended objects with flexible shapes,…

Soft Condensed Matter · Physics 2009-11-13 Ling-Nan Zou , Xiang Cheng , Mark L. Rivers , Heinrich M. Jaeger , Sidney R. Nagel

Localization of plastic strain induced by softening can be objectively described by a regularized plasticity model that postulates a dependence of the current yield stress on a nonlocal softening variable defined by a differential…

Materials Science · Physics 2012-02-02 Milan Jirasek , Jan Zeman , Jaroslav Vondrejc

We have studied the compact phase conformations of semi-flexible polymer chains confined in two dimensional nonhomogeneous media, modelled by fractals that belong to the family of modified rectangular (MR) lattices. Members of the MR family…

Statistical Mechanics · Physics 2019-05-22 D Marčetić , S Elezović-Hadžić , N Adžić , I Živić
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