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Intracellular positive ions neutralise negative charges on the phosphates of a DNA strand conferring greater strength on the hydrogen bonds that connect complementary strands into a double helix and so confer enhanced stability. Beyond a…

Soft Condensed Matter · Physics 2016-04-25 Arghya Maity , Amar Singh , Navin Singh

The complexity of the primary structure of human DNA is explored using methods from nonequilibrium statistical mechanics, dynamical systems theory and information theory. The use of chi-square tests shows that DNA cannot be described as a…

Genomics · Quantitative Biology 2015-06-17 A. Provata , C. Nicolis , G. Nicolis

Cryptography is the science that secures data and communication over the network by applying mathematics and logic to design strong encryption methods. In the modern era of e-business and e-commerce the protection of confidentiality,…

Cryptography and Security · Computer Science 2023-08-07 Mandrita Mondal , Kumar S. Ray

The robust and automated determination of crystal symmetry is of utmost importance in material characterization and analysis. Recent studies have shown that deep learning (DL) methods can effectively reveal the correlations between X-ray or…

Computational Physics · Physics 2020-05-27 Leslie Ching Ow Tiong , Jeongrae Kim , Sang Soo Han , Donghun Kim

A mathematical algorithm to describe DNA or RNA sequences of $N$ nucleotides by a string of $2N$ integers numbers is presented in the framework of the so called crystal basis model of the genetic code. The description allows to define a not…

Other Quantitative Biology · Quantitative Biology 2017-03-06 A. Sciarrino

Nonparametric two sample or homogeneity testing is a decision theoretic problem that involves identifying differences between two random variables without making parametric assumptions about their underlying distributions. The literature is…

Statistics Theory · Mathematics 2015-10-14 Aaditya Ramdas , Nicolas Garcia , Marco Cuturi

The base sequences of DNA contain the genetic code and to decode it a double helical DNA has to open its base pairs. Recent studies have shown that one can use a third strand to identify the base sequences without opening the double helix…

Soft Condensed Matter · Physics 2014-11-21 Jaya Maji , Somendra M. Bhattacharjee , Flavio Seno , Antonio Trovato

Within the Landau-de Gennes theory of liquid crystals, we study theoretically the equilibrium configurations with uniaxial symmetry. We show that the uniaxial symmetry constraint is very restrictive and can in general not be satisfied,…

Analysis of PDEs · Mathematics 2015-10-28 Xavier Lamy

The recently developed information-theoretic approach to crystallographic symmetry classifications and quantifications in two dimensions (2D) from digital transmission electron and scanning probe microscope images is adapted for the…

Materials Science · Physics 2022-08-10 Peter Moeck , Lukas von Koch

The theory of dynamical diffraction (DD) in perfect crystals is the backbone of high-precision neutron and X-ray diffraction experiments, enabling accurate determination of crystal structure factors and the realization of perfect crystal…

Applied Physics · Physics 2026-04-29 Owen Lailey , Dusan Sarenac , David G. Cory , Michael G. Huber , Dmitry A. Pushin

We propose a theory of quantum (statistical) measurement which is close, in spirit, to Hepp's theory, which is centered on the concepts of decoherence and macroscopic (classical) observables, and apply it to a model of the Stern-Gerlach…

Mathematical Physics · Physics 2023-03-01 Walter F. Wreszinski

Debates about conductivity of DNAs have been recently renewed due to contradictory results of direct measurements by use of electrical contacts to molecules. In several works it was discovered that double-stranded (ds)DNAs are conductors:…

Condensed Matter · Physics 2007-05-23 A. Yu. Kasumov , D. V. Klinov

Within the Landau-de Gennes theory of liquid crystals, we study theoretically the equilibrium configurations with uniaxial symmetry. For an arbitrary form of the bulk energy density, we show that energy minimizers among uniaxially symmetric…

Soft Condensed Matter · Physics 2013-09-19 Xavier Lamy

A practical quantum measurement method based on the quantum nature of anti-bunching photon emission has been developed to detect single particles without the restriction of the diffraction limit. By simultane- ously counting the…

Quantum Physics · Physics 2013-05-24 Jin-Ming Cui , Fang-Wen Sun , Xiang-Dong Chen , Zhao-Jun Gong , Guang-Can Guo

The recently developed information-theoretic approach to crystallographic symmetry classifications and quantifications in two dimensions (2D) from digital transmission electron and scanning probe microscope images is adapted for the…

Materials Science · Physics 2022-02-15 Peter Moeck , Lukas von Koch

Goedel's Incompleteness Theorems have the same scientific status as Einstein's principle of relativity, Heisenberg's uncertainty principle, and Watson and Crick's double helix model of DNA. Our aim is to discuss some new faces of the…

Quantum Physics · Physics 2007-05-23 Cristian S. Calude

Because of the double-helical structure of DNA, in which two strands of complementary nucleotides intertwine around each other, a covalently closed DNA molecule with no interruptions in either strand can be viewed as two interlocked…

Biomolecules · Quantitative Biology 2015-05-13 Lauren A. Britton , Wilma K. Olson , Irwin Tobias

According to the Schwarz symmetry principle, every harmonic function vanishing on a real analytic curve has an odd continuation, while a harmonic function satisfying homogeneous Neumann condition has the even continuation. There are…

Analysis of PDEs · Mathematics 2019-01-07 Murdhy Aldawsari , Tatiana Savina

The theory of Bloembergen and Pershan for the light waves at the boundary of nonlinear media is extended to a nonlinear two-dimensional atomic crystal, i.e. a single planar atomic lattice, placed in between linear bulk media. The crystal is…

Optics · Physics 2016-01-20 Michele Merano

The reader is informed about a method for the objective identification of the plane symmetry group of a "noisy" crystal pattern. Without giving numerical details, this information theory based method is applied to two beautiful pieces of…

Computational Physics · Physics 2023-05-03 Peter Moeck
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