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Related papers: Virus shapes and buckling transitions in spherical…

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We study how the stability of spherical crystalline shells under external pressure is influenced by the defect structure. In particular, we compare stability for shells with a minimal set of topologically-required defects to shells with…

Soft Condensed Matter · Physics 2015-03-23 Duanduan Wan , Mark J. Bowick , Rastko Sknepnek

The best-understood crystal ordering transition is that of two-dimensional freezing, which proceeds by the rapid eradication of lattice defects as the temperature is lowered below a critical threshold. But crystals that assemble on closed…

Soft Condensed Matter · Physics 2018-02-22 Rodrigo E. Guerra , Colm P. Kelleher , Andrew D. Hollingsworth , Paul M. Chaikin

Obtaining general relations between macroscopic properties of random assemblies, such as density, and the microscopic properties of their constituent particles, such as shape, is a foundational challenge in the study of amorphous materials.…

Soft Condensed Matter · Physics 2016-05-05 Yoav Kallus

We examine the deformation of homogeneous spherical fluid vesicles along their equator by a circular rigid ring. We consider deformations preserving the axial and equatorial mirror symmetries of the vesicles. The configurations of the…

Soft Condensed Matter · Physics 2025-03-27 Pablo Vázquez-Montejo , Bojan Božič , Jemal Guven

The equilibrium properties of block copolymer micelles confined in polymer thin films are investigated using self-consistent field theory. The theory is based on a model system consisting of AB diblock copolymers and A homopolymers. Two…

Soft Condensed Matter · Physics 2014-01-16 Jiajia Zhou , An-Chang Shi

We use computer simulations to study a model, first proposed by Wales [1], for the reversible and monodisperse self-assembly of simple icosahedral virus capsid structures. The success and efficiency of assembly as a function of…

Biomolecules · Quantitative Biology 2010-02-24 Iain G. Johnston , Ard A. Louis , Jonathan P. K. Doye

We theoretically explain the complete sequence of shapes of deflated spherical shells. Decreasing the volume, the shell remains spherical initially, then undergoes the classical buckling instability, where an axisymmetric dimple appears,…

Soft Condensed Matter · Physics 2015-05-12 Sebastian Knoche , Jan Kierfeld

We investigate the defect structures forming around two nanoparticles in a Gay-Berne nematic liquid crystal using molecular simulations. For small separations, disclinations entangle both particles forming the figure of eight, the figure of…

Soft Condensed Matter · Physics 2017-02-10 Anja Humpert , Samuel F. Brown , Michael P. Allen

The dense packing of interacting particles on spheres has proved to be a useful model for virus capsids and colloidosomes. Indeed, icosahedral symmetry observed in virus capsids corresponds to potential energy minima that occur for magic…

Soft Condensed Matter · Physics 2017-03-03 Stefan Paquay , Halim Kusumaatmaja , David J. Wales , Roya Zandi , Paul van der Schoot

Gaussian particles provide a flexible framework for modelling and simulating three-dimensional star-shaped random sets. In our framework, the radial function of the particle arises from a kernel smoothing, and is associated with an…

In this work we study how a viral capsid can change conformation using techniques of Large Deviations Theory for stochastic differential equations. The viral capsid is a model of a complex system in which many units - the proteins forming…

Statistical Mechanics · Physics 2017-07-19 Paolo Cermelli , Giuliana Indelicato , Emilio Zappa

Understanding the mechanical instabilities of two-dimensional membranes has strong connection to the subjects of structure instabilities, morphology control and materials failures. In this work, we investigate the plastic mechanism…

Soft Condensed Matter · Physics 2024-04-30 Honghui Sun , Zhenwei Yao

Monodisperse spherical colloidal particles confined within emulsion droplets can crystallize into icosahedral clusters. Experimentally it was observed that a few large colloidal particles added as defects preferentially migrate to the…

Soft Condensed Matter · Physics 2026-04-29 Praveen K. Bommineni , Junwei Wang , Nicolas Vogel , Michael Engel

Cell extrusion is an essential mechanism for controlling cell density in epithelial tissues. Another essential element of epithelia is curvature, which is required to achieve complex shapes, like in the lung or intestine. Here we introduce…

Particle shape is a key to the space-filling and strength properties of granular matter. We consider a shape parameter $\eta$ describing the degree of distortion from a perfectly spherical shape. Encompassing most specific shape…

Spontaneous material shape changes, such as swelling, growth or thermal expansion, can be used to trigger dramatic elastic instabilities in thin shells. These instabilities originate in geometric incompatibility between the preferred…

Soft Condensed Matter · Physics 2022-04-18 Andrea Giudici , John S. Biggins

Determining the equilibrium configuration and shape of curved two-dimensional films with (generalized) liquid crystalline (LC) order is a difficult infinite dimensional problem of direct relevance to the study of generalized polymersomes,…

Soft Condensed Matter · Physics 2017-05-09 Mark J. Bowick , Oksana V. Manyuhina , Francesco Serafin

We study the equilibrium configurations related to the growth of an elastic fibre in a confining flexible ring. This system represents a paradigm for a variety of biological, medical, and engineering problems. We consider a simplified…

Soft Condensed Matter · Physics 2022-10-17 Arsenio Cutolo , Massimiliano Fraldi , Gaetano Napoli , Giuseppe Puglisi

On the example of exceptional families of viruses we i) show the existence of a completely new type of matter organization in nanoparticles, in which the regions with a chiral pentagonal quasicrystalline order of protein positions are…

Biological Physics · Physics 2012-02-08 O. V. Konevtsova , S. B. Rochal , V. L. Lorman

We use numerical simulations to understand how random deviations from the ideal spherical shape affect the ability of hard particles to form fcc crystalline structures. Using a system of hard spheres as a reference, we determine the…

Soft Condensed Matter · Physics 2010-12-23 William L. Miller , Angelo Cacciuto