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Related papers: Pattern formation driven by nematic ordering of as…

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A model for a monolayer of two types of particles spontaneously forming ordered patterns is studied by a mesoscopic theory and by MC simulations. We assume hard-cores of the same size for both components, short-range attraction long-range…

Soft Condensed Matter · Physics 2023-11-10 O. Patsahan , A. Meyra , A. Ciach

Spatial distribution of the human population is distinctly heterogeneous, e.g. showing significant difference in the population density between urban and rural areas. In the historical perspective, i.e. on the timescale of centuries, the…

Adaptation and Self-Organizing Systems · Physics 2022-08-30 Anna Zincenko , Sergei Petrovskii , Vitaly Volpert

The phenomenon of pattern formation in nonlinear optical resonators is commonly related to an off-resonance excitation mechanism, where patterns occur due to mismatch between the excitation and resonance frequency. In this paper we show…

Pattern Formation and Solitons · Physics 2009-10-31 Kestutis Staliunas , Victor J. Sanchez-Morcillo

Using agent-based simulations of self-propelled particles subject to short-range repulsion and nematic alignment we explore the dynamical phases of a dense active material confined to the surface of a sphere. We map the dynamical phase…

Soft Condensed Matter · Physics 2018-04-25 Silke Henkes , M. Cristina Marchetti , Rastko Sknepnek

We use linear stability analysis to show that an isotropic phase of elongated particles with dipolar flow fields can develop nematic order as a result of their activity. We argue that ordering is favoured if the particles are flow-aligning…

Soft Condensed Matter · Physics 2020-03-18 Sreejith Santhosh , Mehrana R. Nejad , Amin Doostmohammadi , Julia M. Yeomans , Sumesh P. Thampi

Pattern formation in systems with a conserved quantity is considered by studying the appropriate amplitude equations. The conservation law leads to a large-scale neutral mode that must be included in the asymptotic analysis for pattern…

Pattern Formation and Solitons · Physics 2009-10-31 P. C. Matthews , S. M. Cox

Anisotropic collective patterns occur frequently in the morphogenesis of 2D biofilms. These patterns are often attributed to growth regulation mechanisms and differentiation based on gradients of diffusing nutrients and signalling…

Biological Physics · Physics 2017-10-11 Cameron Zachreson , Xinhui Yap , Erin S. Gloag , Raz Shimoni , Cynthia B. Whitchurch , Milos Toth

Polymers are a primary building block in many biomaterials, often interacting with anisotropic backgrounds. While previous studies have considered polymer dynamics within nematic solvents, rarely are the the effects of anisotropic viscosity…

Polymers with active segments constitute prospective future materials and are used as a model for some biological systems such as chromatin. The directions of the active forces are typically introduced with temporal or spatial correlations…

Soft Condensed Matter · Physics 2024-11-25 Adam H. T. P. Höfler , Iurii Chubak , Christos N. Likos , Jan Smrek

We study the influence of fluctuations in molecular shape on the stability of the biaxial nematic phase by generalizing the mean field model of Mulder and Ruijgrok [Physica A {\bf 113}, 145 (1982)]. We limit ourselves to the case when the…

Soft Condensed Matter · Physics 2011-11-09 Lech Longa , Grzegorz Pająk , Thomas Wydro

The polymerization of actin via branching at a cell membrane containing nucleation-promoting factors is simulated using a stochastic-growth methodology. The polymerized-actin distribution displays three types of behavior: a) traveling…

Biological Physics · Physics 2015-05-19 Anders E. Carlsson

Experiments on a thin layer of cohesive wet granular matter under vertical vibrations reveal kink separated domains that collide with the container at different phases. Due to the strong cohesion arising from the formation of liquid bridges…

Soft Condensed Matter · Physics 2015-07-13 Lorenz Butzhammer , Simeon Völkel , Ingo Rehberg , Kai Huang

When liquid-crystal elastomers are prepared without any alignment, disordered polydomain structures emerge as the materials are cooled into the nematic phase. These polydomain structures have been attributed to quenched disorder in the…

Soft Condensed Matter · Physics 2015-11-04 Ayhan Duzgun , Jonathan V. Selinger

The actin cytoskeleton is a key component in the machinery of eukaryotic cells, and it selfassembles out of equilibrium into a wide variety of biologically crucial structures. While the molecular mechanisms involved are well characterized,…

Soft Condensed Matter · Physics 2017-01-04 Giulia Foffano , Nicolas Levernier , Martin Lenz

We review the depinning and nonequilibrium phases of collectively interacting particle systems driven over random or periodic substrates. This type of system is relevant to vortices in type-II superconductors, sliding charge density waves,…

Superconductivity · Physics 2017-12-06 C. Reichhardt , C. J. Olson Reichhardt

We study the dynamics of pattern formation in a minimal model for active mixtures made of microtubules and molecular motors. We monitor the evolution of the (conserved) microtubule density and of the (non-conserved) nematic order parameter,…

Soft Condensed Matter · Physics 2020-05-25 Ivan Maryshev , Alexander Morozov , Andrew B. Goryachev , Davide Marenduzzo

Non-reciprocal interactions fueled by local energy consumption can be found in biological and synthetic active matter at scales where viscoelastic forces are important. Such systems can be described by "odd" viscoelasticity, which assumes…

Soft Condensed Matter · Physics 2023-10-31 Carlos Floyd , Aaron R. Dinner , Suriyanarayanan Vaikuntanathan

We report that the properties of the isotropic to nematic liquid crystalline phase transition of F-actin depend critically on the average filament length. For average filament lengths longer than 2 $\mu$m, we confirm previous findings that…

Biological Physics · Physics 2009-11-11 Jorge Viamontes , Patrick W. Oakes , Jay X. Tang

We study the behaviour of interacting self-propelled particles, whose self-propulsion speed decreases with their local density. By combining direct simulations of the microscopic model with an analysis of the hydrodynamic equations obtained…

Statistical Mechanics · Physics 2012-06-25 F. D. C. Farrell , J. Tailleur , D. Marenduzzo , M. C. Marchetti

We explore pattern formation in an active fluid system involving two chemical species that regulate active stress: a fast-diffusing species ($A$) and a slow-diffusing species ($I$). The growth of species $A$ is modelled using a nonlinear…

Pattern Formation and Solitons · Physics 2026-05-26 Joydeep Das , Abhishek Chaudhuri , Sudeshna Sinha