Related papers: Correlation matrix for quartet codon usage
We apply classical quartet techniques to the problem of phylogenetic decisiveness and find a value $k$ such that all collections of at least $k$ quartets are decisive. Moreover, we prove that this bound is optimal and give a lower-bound on…
In this work it is shown that 20 canonical amino acids (AAs) within genetic code appear to be a whole system with strict AAs positions; more exactly, with AAs ordinal number in three variants; first variant 00-19, second 00-21 and third…
We propose new lepton-mixing textures that may be enforced through well-defined symmetries in renormalizable models. Each of our textures has four sum rules for the neutrino mass observables. The models are based on the type-I seesaw…
In this paper entropy based methods are compared and used to measure structural diversity of an ensemble of 21 classifiers. This measure is mostly applied in ecology, whereby species counts are used as a measure of diversity. The measures…
In the framework of the crystal basis model of the genetic code, where each codon is assigned to an irreducible representation of $U_{q \to 0}(sl(2) \oplus sl(2))$, single base mutation matrices are introduced. The strength of the mutation…
A unified description of fermionic mixing is proposed which assumes that in certain basis ($i$) a single complex unitary matrix $V$ diagonalizes mass matrices of all fermions to the leading order, ($ii$) the SU(5) relation $M_d=M_l^T$…
The large size limit of matrix integrals with quartic potential may be used to count alternating links and tangles. The removal of redundancies amounts to renormalizations of the potential. This extends into two directions: higher genus and…
The NA48/2 Collaboration at CERN has accumulated unprecedented statistics of rare kaon decays in the Ke4 modes: Ke4(+-) ($K^\pm \to \pi^+ \pi^- e^\pm \nu$) and Ke4(00) ($K^\pm \to \pi^0 \pi^0 e^\pm \nu$) with nearly one percent background…
A viable formulation of gauge theory with extra generations in terms of quaternionic fields is presented. For the theory to be acceptable, the number of generations should be equal to or greater than 4. The quark-lepton mass matrices are…
Coding information is the main source of heterogeneity (non-randomness) in the sequences of bacterial genomes. This information can be naturally modeled by analysing cluster structures in the "in-phase" triplet distributions of relatively…
The search for possible mixing patterns of charged leptons and neutrinos is important to get clues of the origin of nearly maximal mixings, since there are some preferred bases of the lepton mass matrices given by underlying theories. We…
We review a class of matrix models whose degrees of freedom are matrices with anticommuting elements. We discuss the properties of the adjoint fermion one-, two- and gauge invariant D-dimensional matrix models at large-N and compare them…
The systematics of indices of physico-chemical properties of codons and amino acids across the genetic code are examined. Using a simple numerical labelling scheme for nucleic acid bases, data can be fitted as low-order polynomials of the 6…
In this paper I will discuss the overlap between the concept of Shannon Entropy and the concept of electronic correlation. Quantum Monte Carlo numerical results for the uniform electron gas are also presented; these latter on the one hand…
We study the implications of generalized CP transformations acting on the mass matrices of charged leptons in a model-independent way. Generalized $e-\mu$, $e-\tau$ and $\mu-\tau$ symmetries are considered in detail. In all cases the…
Correlation function of complex eigenvalues of N by N random matrices drawn from non-Hermitean random matrix ensemble of symplectic symmetry is given in terms of a quaternion determinant. Spectral properties of Gaussian ensembles are…
Matrices are two-dimensional data structures allowing one to conceptually organize information. For example, adjacency matrices are useful to store the links of a network; correlation matrices are simple ways to arrange gene co-expression…
Clifford Unification describes all the observed fundamental fermions in terms of seven commuting elements of the $Cl_{7,7}$ Clifford algebra. The eigenvalues of each commuting element define a binary quantum number, which relates to a…
Handling highly dependent data is crucial in clinical trials, particularly in fields related to ophthalmology. Incorrectly specifying the dependency structure can lead to biased inferences. Traditionally, models rely on three fixed…
We study a microscopic model for four spinless fermions on the square lattice which exhibits a quartet bound state in the strong coupling regime. The four-particle quantum states are analyzed using symmetry arguments and by introducing a…