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Related papers: Self-avoiding knots

200 papers

Solutions of semiflexible polymers confined by repulsive planar walls are studied by density functional theory and Molecular Dynamics simulations, to clarify the competition between the chain alignment favored by the wall and the depletion…

Soft Condensed Matter · Physics 2016-05-25 Sergei A. Egorov , Andrey Milchev , Peter Virnau , Kurt Binder

I consider the problem of a thin membrane on which a metric has been prescribed, for example by lithographically controlling the local swelling properties of a polymer thin film. While any amount of swelling can be accommodated locally,…

Soft Condensed Matter · Physics 2015-05-13 Christian D. Santangelo

An extensive study of single block copolymer knots containing two kinds of monomers $A$ and $B$ is presented. The knots are in a solution and their monomers are subjected to short range interactions that can be attractive or repulsive. In…

Soft Condensed Matter · Physics 2016-04-08 Franco Ferrari

The conformations of interacting linear polymers on a dynamical planar random lattice are studied using a random two-matrix model. An exact expression for the partition function of self-avoiding chains subject to attractive contact…

Condensed Matter · Physics 2008-02-03 Simon Dalley

We study the link between three seeming-disparate cases of self-avoiding polymers: strongly overlapping multiple chains in dilute solution, chains under spherical confinement, and the onset of semi-dilute solutions. Our main result is that…

Biological Physics · Physics 2007-05-23 Suckjoon Jun , Axel Arnold , Bae-Yeun Ha

The miscibility of polymer blends, a classical problem in polymer science, may be altered, if one or both of the component do not have chain ends. Based on the idea of {\it topological volume}, we propose a mean-field theory to clarify how…

Soft Condensed Matter · Physics 2016-05-04 Takahiro Sakaue , Chihiro H. Nakajima

Statistical topography of two-dimensional interfaces in the presence of quenched disorder is studied utilizing combinatorial optimization algorithms. Finite-size scaling is used to measure geometrical exponents associated with contour loops…

Disordered Systems and Neural Networks · Physics 2009-10-30 Chen Zeng , J. Kondev , D. McNamara , A. A. Middleton

We calculate the mean end-to-end distance ($R$) of a self-avoiding polymer encapsulated in an infinitely long cylinder with radius $D$. A self-consistent perturbation theory is used to calculate $R$ as a function of $D$ for impenetrable…

Soft Condensed Matter · Physics 2016-08-31 G. Morrison , D. Thirumalai

The existence of topologically slice knots that are of infinite order in the knot concordance group followed from Freedman's work on topological surgery and Donaldson's gauge theoretic approach to 4-manifolds. Here, as an application of…

Geometric Topology · Mathematics 2016-09-15 Matthew Hedden , Se-Goo Kim , Charles Livingston

A thin film at a liquid interface responds to uniaxial confinement by wrinkling and then by folding; its shape and energy have been computed exactly before self contact. Here, we address the mechanics of large folds, i.e. folds that absorb…

Soft Condensed Matter · Physics 2014-10-22 Vincent Démery , Benny Davidovitch , Christian D. Santangelo

We study by Monte Carlo simulations a model of knotted polymer ring adsorbing onto an impenetrable, attractive wall. The polymer is described by a self-avoiding polygon (SAP) on the cubic lattice. We find that the adsorption transition…

Soft Condensed Matter · Physics 2009-11-13 B. Marcone , E. Orlandini , A. L. Stella

The statistical mechanics of polymer loops entangled in the two-dimensional array of randomly distributed obstacles of infinite length is discussed. The area of the loop projected to the plane perpendicular to the obstacles is used as a…

Condensed Matter · Physics 2009-10-28 Matthias Otto , Thomas A. Vilgis

In [Pal et al., arXiv:2206.03552], the authors discuss how an unsupported flat annulus contracted at its inner boundary by a factor $\Delta$, buckles into a radial wrinkling pattern that is fully isometric and tension-free. What selects the…

Soft Condensed Matter · Physics 2023-06-28 Anshuman S. Pal

Ropelength and embedding thickness are related measures of geometric complexity of classical knots and links in Euclidean space. In their recent work, Freedman and Krushkal posed a question regarding lower bounds for embedding thickness of…

Geometric Topology · Mathematics 2020-01-14 R. Komendarczyk , A. Michaelides

We investigate the motion of two overlapping polymers with self-avoidance confined in a narrow 2d box. A statistical model is constructed using blob free-energy arguments. We find spontaneous segregation under the condition: $L > R_{//}$,…

Biological Physics · Physics 2012-11-20 Ya Liu , Bulbul Chakraborty

The Rouse model has recently been modified to take into account the excluded volume interactions that exist between various parts of a polymer chain by incorporating a narrow Gaussian repulsive potential between pairs of beads on the Rouse…

Soft Condensed Matter · Physics 2020-07-03 J Ravi Prakash

Contours associated to many interesting low-temperature statistical mechanics models (2D Ising model, (2+1)D SOS interface model, etc) can be described as self-interacting and self-avoiding walks on $\mathbb Z^2$. When the model is defined…

Probability · Mathematics 2015-06-22 Dmitry Ioffe , Senya Shlosman , Fabio Lucio Toninelli

We investigate the sliding strength of thin filaments in frictional contact with a translating cylinder, perpendicular to the filaments' axes, in knotted (clove hitch) and unknotted (capstan) configurations. Recent work reported superlinear…

Soft Condensed Matter · Physics 2026-04-09 Javier Sabater , Ji-Sung Park , Jérôme Crassous , Sébastien Neukirch , Pedro M. Reis

Obstructions influence the growth and expansion of bodies in a wide range of settings -- but isolating and understanding their impact can be difficult in complex environments. Here, we study obstructed growth/expansion in a model system…

Soft Condensed Matter · Physics 2024-01-24 Abigail Plummer , Caroline Adkins , Jean-François Louf , Andrej Košmrlj , Sujit S. Datta

Polymers in a melt may be subject to topological constraints, as in the example of unlinked polymer rings. How to do statistical mechanics in the presence of such constraints remains a fundamental open problem. We study the effect of…

Statistical Mechanics · Physics 2015-12-04 Pablo Serna , Guy Bunin , Adam Nahum
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