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Diverse biological networks exhibit universal features distinguished from those of random networks, calling much attention to their origins and implications. Here we propose a minimal evolution model of Boolean regulatory networks, which…

Molecular Networks · Quantitative Biology 2014-11-26 Deok-Sun Lee

In this paper, we propose an evolving network model growing fast in units of module, based on the analysis of the evolution characteristics in real complex networks. Each module is a small-world network containing several interconnected…

Physics and Society · Physics 2011-10-11 Zou Zhi-Yun , Liu Peng , Lei Li , Gao Jian-Zhi

We propose and study a model of traffic in communication networks. The underlying network has a structure that is tunable between a scale-free growing network with preferential attachments and a random growing network. To model realistic…

Networking and Internet Architecture · Computer Science 2008-06-12 Zonghua Liua , Weichuan Ma , Huan Zhang , Yin Sun , P. M. Hui

We propose a consistent approach to the statistics of the shortest paths in random graphs with a given degree distribution. This approach goes further than a usual tree ansatz and rigorously accounts for loops in a network. We calculate the…

Statistical Mechanics · Physics 2010-04-05 S. N. Dorogovtsev , J. F. F. Mendes , A. N. Samukhin

We study the influence of complex graphs on the metastability and fixation properties of a set of evolutionary processes. In the framework of evolutionary game theory, where the fitness and selection are frequency-dependent and vary with…

Statistical Mechanics · Physics 2012-11-01 Michael Assaf , Mauro Mobilia

We introduce a new random graph model motivated by biological questions relating to speciation. This random graph is defined as the stationary distribution of a Markov chain on the space of graphs on $\{1, \ldots, n\}$. The dynamics of this…

Probability · Mathematics 2019-06-24 François Bienvenu , Florence Débarre , Amaury Lambert

We consider a growing network, whose growth algorithm is based on the preferential attachment typical for scale-free constructions, but where the long-range bonds are disadvantaged. Thus, the probability to get connected to a site at…

Statistical Mechanics · Physics 2009-11-07 R. Xulvi-Brunet , I. M. Sokolov

We study scale-free networks constructed via a cooperative Achlioptas growth process. Links between nodes are introduced in the network in order to produce a scale-free graph with given exponent lambda for the degree distribution, but the…

Physics and Society · Physics 2009-10-13 Filippo Radicchi , Santo Fortunato

We consider the edge-triangle model, a two-parameter family of exponential random graphs in which dependence between edges is introduced through triangles. In the so-called replica symmetric regime, the limiting free energy exists together…

Probability · Mathematics 2023-01-31 Alessandra Bianchi , Francesca Collet , Elena Magnanini

A general population evolution model is considered. Any individual of the population is characterized by its score. Certain general conditions are assumed concerning the number of the individuals and their scores. Asymptotic theorems are…

Probability · Mathematics 2016-04-07 I. Fazekas , Cs. Noszály , A. Perecsényi

Many networks exhibit scale free behavior where their degree distribution obeys a power law for large vertex degrees. Models constructed to explain this phenomena have relied on preferential attachment where the networks grow by the…

Physics and Society · Physics 2012-02-08 Vijay K Samalam

We present the distance matrix evolution for different types of networks: exponential, scale-free and classical random ones. Statistical properties of these matrices are discussed as well as topological features of the networks. Numerical…

Statistical Mechanics · Physics 2007-05-23 K. Malarz , K. Kulakowski

We give sufficient conditions under which a random graph with a specified degree sequence is symmetric or asymmetric. In the case of bounded degree sequences, our characterisation captures the phase transition of the symmetry of the random…

Combinatorics · Mathematics 2020-04-07 Lochlan Brick , Pu Gao , Angus Southwell

We introduce a deterministic model for scale-free networks, whose degree distribution follows a power-law with the exponent $\gamma$. At each time step, each vertex generates its offsprings, whose number is proportional to the degree of…

Statistical Mechanics · Physics 2009-11-07 S. Jung , S. Kim , B. Kahng

Random networks with complex topology are common in Nature, describing systems as diverse as the world wide web or social and business networks. Recently, it has been demonstrated that most large networks for which topological information…

Disordered Systems and Neural Networks · Physics 2016-08-31 Albert-Laszlo Barabasi , Reka Albert , Hawoong Jeong

A majority of studied models for scale-free networks have degree distributions with exponents greater than $2$. Real networks, however, can demonstrate essentially more heavy-tailed degree distributions. We explore two models of scale-free…

Physics and Society · Physics 2016-12-14 Gábor Timár , Sergey N. Dorogovtsev , José Fernando F. Mendes

We study stochastic processes that generate non-growing complex networks without self-loops and multiple edges (simple graphs). The work concentrates on understanding and formulation of constraints which keep the rewiring stochastic…

Physics and Society · Physics 2009-07-10 Tomas Hruz , Michal Natora , Madhuresh Agrawal

The Watts-Strogatz algorithm of transferring the square lattice to a small world network is modified by introducing preferential rewiring constrained by connectivity demand. The evolution of the network is two-step: sequential preferential…

Statistical Mechanics · Physics 2009-11-11 Danuta Makowiec

We present a Markov Chain Monte Carlo method for sampling cycle length in large graphs. Cycles are treated as microstates of a system with many degrees of freedom. Cycle length corresponds to energy such that the length histogram is…

Disordered Systems and Neural Networks · Physics 2013-05-29 Konstantin Klemm , Peter F. Stadler

In a graph, nodes can be characterized locally (with their degree $k$) or globally (e.g. with their average length path $\xi$ to other nodes). Here we investigate how $\xi$ depends on $k$. Our earlier algorithm of the construction of the…

Statistical Mechanics · Physics 2007-05-23 K. Malarz , K. Kulakowski