Related papers: Characteristic length of random knotting for cylin…
We introduce a two-dimensional lattice model for the description of knotted polymer rings. A polymer configuration is modeled by a closed polygon drawn on the square diagonal lattice, with possible crossings describing pairs of strands of…
The role of the topology and its relation with the geometry of biopolymers under different physical conditions is a nontrivial and interesting problem. Aiming at understanding this issue for a related simpler system, we use Monte Carlo…
The subject of this work is the adsorption transition of a long flexible self-avoiding polymer chain onto a rigid thin rod. The rod is represented by a cylinder of radius R with a short-ranged attractive surface potential for the chain…
We study approximations of smooth convex bodies by random ball-polytopes. We examine the following probability model: let $K\subset{\bf R}^d$ be a convex body such that $K$ slides freely in a ball of radius $R>0$ and has $C^2$ smooth…
We study how confinement affects topology and conformations in polymer films of varying thickness $h$. The knotting probability exhibits a maximum at intermediate thicknesses near the bulk radius of gyration $h \approx R_\mathrm{g,bulk}$,…
The nearest neighbor contacts between the two halves of an N-site lattice self-avoiding walk offer an unusual example of scaling random geometry: for N going to infinity they are strictly finite in number but their radius of gyration Rc is…
We explore the probability that a permutation sampled from the symmetric group of order n uniformly at random has cycles of lengths not exceeding r. Asymptotic formulas valid in specified regions for the ratio n/r are obtained using the…
In a previous work, the first and third authors studied a random knot model for all two-bridge knots using billiard table diagrams. Here we present a closed formula for the distribution of the crossing numbers of such random knots. We also…
We investigate the typical cycle lengths, the total number of cycles, and the number of finite cycles in random permutations whose probability involves cycle weights. Typical cycle lengths and total number of cycles depend strongly on the…
We have calculated long series expansions for self-avoiding walks and polygons on the honeycomb lattice, including series for metric properties such as mean-squared radius of gyration as well as series for moments of the area-distribution…
We consider a natural model of random knotting- choose a knot diagram at random from the finite set of diagrams with n crossings. We tabulate diagrams with 10 and fewer crossings and classify the diagrams by knot type, allowing us to…
For a positive integer $n\ge 3$, the collection of $n$-sided polygons embedded in $3$-space defines the space of geometric knots. We will consider the subspace of equilateral knots, consisting of embedded $n$-sided polygons with unit length…
We probe the character of knotting in open, confined polymers, assigning knot types to open curves by identifying their projections as virtual knots. In this sense, virtual knots are transitional, lying in between classical knot types,…
Given a set C in R^d, let p(C) be the probability that a random d-dimensional unimodular lattice, chosen according to Haar measure on SL(d,Z)\SL(d,R), is disjoint from C\{0}. For special convex sets C we prove bounds on p(C) which are sharp…
We prove a polynomial upper bound for the localization length of the Lorentz mirror model and the Manhattan model on the even cylinder. The main input is a conditional cylinder-localization theorem in the winding regime: if short-direction…
We use the finite lattice method to calculate the radius of gyration, the first and second area-weighted moments of self-avoiding polygons on the square lattice. The series have been calculated for polygons up to perimeter 82. Analysis of…
For a natural extension of the circular unitary ensemble of order n, we study as n tends to infinity, the asymptotic behavior of the sequence of orthogonal polynomials with respect to the spectral measure. The last term of this sequence is…
For polyhedral convex cones in ${\mathbb R}^d$, we give a proof for the conic kinematic formula for conic curvature measures, which avoids the use of characterization theorems. For the random cones defined as typical cones of an isotropic…
Using a lattice model of polymers in a tube, we define one way to characterise different configurations of a given knot as either "local" or "non-local" and, for several ring polymer models, we provide both theoretical and numerical…
We study two simple modifications of self-avoiding polygons. Osculating polygons are a super-set in which we allow the perimeter of the polygon to touch at a vertex. Neighbour-avoiding polygons are only allowed to have nearest neighbour…