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We present an efficient point-particle approach to simulate reaction-diffusion processes of spherical absorbing particles in the diffusion-limited regime, as simple models of cellular uptake. The exact solution for a single absorber is used…

Fluid Dynamics · Physics 2018-02-14 A. Sozza , F. Piazza , M. Cencini , F. De Lillo , G. Boffetta

We develop a cut finite element method for a second order elliptic coupled bulk-surface model problem. We prove a priori estimates for the energy and $L^2$ norms of the error. Using stabilization terms we show that the resulting algebraic…

Numerical Analysis · Mathematics 2014-03-27 Erik Burman , Peter Hansbo , Mats G. Larson , Sara Zahedi

We present a derivation of the sharp-interface limit of a generic fluctuating phase-field model for solidification. As a main result, we obtain a sharp-interface projection which presents noise terms in both the diffusion equation and in…

Materials Science · Physics 2016-08-16 R. Benítez , L. Ramírez-Piscina

In parallel solution of partial differential equations, a complex stencil update formula that accesses multiple layers of neighboring grid points sometimes must be decomposed into atomic stages, ones that access only immediately neighboring…

Numerical Analysis · Mathematics 2017-03-23 Qiqi Wang

We consider a non-isothermal multi-phase field model. We subsequently discretize implicitly in time and with linear finite elements. The arising algebraic problem is formulated in two variables where one is the multi-phase field, and the…

Numerical Analysis · Mathematics 2016-05-13 Carsten Gräser , Max Kahnt , Ralf Kornhuber

We propose an accurate and energy-stable parametric finite element method for solving the sharp-interface continuum model of solid-state dewetting in three-dimensional space. The model describes the motion of the film\slash vapor interface…

Numerical Analysis · Mathematics 2023-07-04 Weizhu Bao , Quan Zhao

Phase field simulations play a key role in the understanding of microstructure evolution in additive manufacturing. However, they have been found extremely computationally expensive. One of the reasons is the small time step requirement to…

Computational Physics · Physics 2025-08-01 Chaoqian Yuan , Chinnapat Panwisawas , Ye Lu

Domains of condensed-phase monolayers of chiral molecules exhibit a variety of interesting nonequilibrium structures when formed via pressurization. To model these domain patterns, we add a complex field describing the tilt degree of…

Condensed Matter · Physics 2009-10-28 Royce Kam , Herbert Levine

We introduce a surface finite element method for the numerical solution of Navier-Stokes equations on evolving surfaces with a prescribed deformation of the surface in normal direction. The method is based on approaches for the full surface…

Numerical Analysis · Mathematics 2023-06-16 Veit Krause , Eric Kunze , Axel Voigt

In this work, we develop an accelerated sharp-interface method based on (Hu et al., JCP, 2006) and (Luo et al., JCP, 2015) for multiphase flows simulations. Traditional multiphase simulation methods use the minimum time step of all fluids…

Computational Physics · Physics 2019-05-13 Tian Long , Jinsheng Cai , Shucheng Pan

We propose a seamless multiscale method which approximates the macroscopic behavior of the passive advection-diffusion equations with steady incompressible velocity fields with multi-spatial scales. The method uses decompositions of the…

Numerical Analysis · Mathematics 2016-06-22 Yoonsang Lee , Bjorn Engquist

This paper studies the problem of stability of a parameterized delay differential equations (DDE see equation (0.1)). After discretizing the DDE (0.1), we show that the problem can be equivalently casted into a semi-definite programming…

Optimization and Control · Mathematics 2017-01-03 Dongcai Su

System Level Synthesis (SLS) allows us to construct internally stabilizing controllers for large-scale systems. However, solving large-scale SLS problems is computationally expensive and the state-of-the-art methods consider only state…

Optimization and Control · Mathematics 2022-06-07 Lauren Conger , Shih-Hao Tseng

Block copolymers provide a wonderful platform in studying the soft condensed matter systems. Many fascinating ordered structures have been discovered in bulk and confined systems. Among various theories, the self-consistent field theory…

Soft Condensed Matter · Physics 2019-05-01 Huayi Wei , Ming Xu , Wei Si , Kai Jiang

Stochastic gradient methods are scalable for solving large-scale optimization problems that involve empirical expectations of loss functions. Existing results mainly apply to optimization problems where the objectives are one- or two-level…

Optimization and Control · Mathematics 2018-01-15 Shuoguang Yang , Mengdi Wang , Ethan X. Fang

Kernel methods for solving partial differential equations on surfaces have the advantage that those methods work intrinsically on the surface and yield high approximation rates if the solution to the partial differential equation is smooth…

Numerical Analysis · Mathematics 2024-10-04 Thomas Hangelbroek , Christian Rieger

In this paper, we propose an efficient and flexible algorithm to solve dynamic mean-field planning problems based on an accelerated proximal gradient method. Besides an easy-to-implement gradient descent step in this algorithm, a crucial…

Optimization and Control · Mathematics 2021-03-01 Jiajia Yu , Rongjie Lai , Wuchen Li , Stanley Osher

In this paper, we study triply periodic surfaces with minimal surface area under a constraint in the volume fraction of the regions (phases) that the surface separates. Using a variational level set method formulation, we present a…

Optimization and Control · Mathematics 2015-06-26 Youngjean Jung , Kevin T. Chu , Salvatore Torquato

The numerical computation of shortest paths or geodesics on surfaces, along with the associated geodesic distance, has a wide range of applications. Compared to Euclidean distance computation, these tasks are more complex due to the…

Numerical Analysis · Mathematics 2026-02-11 Hailiang Liu , Laura Zinnel

In this paper we analyze a fully discrete numerical scheme for solving a parabolic PDE on a moving surface. The method is based on a diffuse interface approach that involves a level set description of the moving surface. Under suitable…

Numerical Analysis · Mathematics 2016-12-05 Klaus Deckelnick , Vanessa Styles