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We develop a theory of aggregation using statistical mechanical methods. An example of a complicated aggregation system with several levels of structures is peptide/protein self-assembly. The problem of protein aggregation is important for…

Biomolecules · Quantitative Biology 2023-07-19 John S. Schreck , Jian-Min Yuan

We investigate a Kac-type many particle model that allows a reference-free description of plastic deformation. In the framework of the model a solid body is described by a set of particle positions. A lattice is fitted to the particle…

Mathematical Physics · Physics 2014-08-07 Stephan Luckhaus , Jens Wohlgemuth

We investigate the relaxation process and the dynamical heterogeneities of the kinetically constrained Kob--Anderson lattice glass model, and show that these are characterized by different timescales. The dynamics is well described within…

Soft Condensed Matter · Physics 2011-09-21 Raffaele Pastore , Massimo Pica Ciamarra , Antonio de Candia , Antonio Coniglio

A three-dimensional Multiphysics Lattice Discrete Particle Model (M-LDPM) framework is formulated to investigate the fracture permeability behavior of shale. The framework features a dual lattice system mimicking the mesostructure of the…

Geophysics · Physics 2019-02-12 Weixin Li , Xinwei Zhou , J. William Carey , Luke P. Frash , Gianluca Cusatis

Structural properties of evolving random graphs are investigated. Treating linking as a dynamic aggregation process, rate equations for the distribution of node to node distances (paths) and of cycles are formulated and solved analytically.…

Statistical Mechanics · Physics 2007-05-23 E. Ben-Naim , P. L. Krapivsky

In this article we propose a discrete lattice model to simulate the elastic, plastic and failure behaviour of isotropic materials. Focus is given on the mathematical derivation of the lattice elements, nodes and edges, in the presence of…

Optimization and Control · Mathematics 2015-05-12 Ioannis Dassios , Andrey Jivkov , Andrew Abu-Muharib , Peter James

In this work we report on kinetic Monte-Carlo calculations of resistive switching and the underlying growth dynamics of filaments in an electrochemical metallization device consisting of an Ag/TiO2/Pt sandwich-like thin film system. The…

We present an analytical model to investigate the mechanics of 2-dimensional lattices composed of elastic beams of non-uniform cross-section. Our approach is based on reducing a lattice to a single beam subject to the action of a set of…

Soft Condensed Matter · Physics 2016-02-22 Daniel J. Rayneau-Kirkhope , Marcelo A. Dias

Kinetics of separation between the low and high density phases in a single component Lennard-Jones model has been studied via molecular dynamics simulations, at a very low temperature, in the space dimension $d=2$. For densities close to…

Statistical Mechanics · Physics 2017-04-26 Jiarul Midya , Subir K. Das

A multi-component lattice Boltzmann model recently introduced (R. Benzi et al. Phys. Rev. Lett 102, 026002 (2009)) to describe some dynamical behaviors of soft-flowing materials is theoretically analyzed. Equilibrium and transport…

Soft Condensed Matter · Physics 2015-05-13 R. Benzi , M. Sbragaglia , S. Succi , M. Bernaschi , S. Chibbaro

The thermodynamics of the lattice model of intercalation of ions in crystals is considered in the mean field approximation. Pseudospin formalism is used for the description of interaction of electrons with ions and the possibility of…

Strongly Correlated Electrons · Physics 2009-07-08 T. S. Mysakovych , V. O. Krasnov , I. V. Stasyuk

Accurate models of precipitation kinetics are essential to control and design structural materials. These models are highly sensitive to the thermodynamic description of precipitates. We use atomistic simulations of a model Fe-Cr system to…

Materials Science · Physics 2025-08-04 Anas Abu-Odeh , James Warren

In this paper, we develop a mean-field model for simulating the microstructure evolution of crystalline materials during static recrystallization. The model considers a population of individual cells (i.e. grains and subgrains) growing in a…

Materials Science · Physics 2020-05-18 Arthur Després , Michael Greenwood , Chad Sinclair

We review the physical properties of macromolecular networks, consisting of semiflexible polymers such as actin. We start by giving a theoretical analysis of the conformational statistics and mechanical response of single filaments.…

Soft Condensed Matter · Physics 2008-02-03 Erwin Frey , Klaus Kroy , Jan Wilhelm , Erich Sackmann

We introduce an accurate, self-contained and automatic atom based numerical algorithm to characterize grain distributions in two dimensional Phase Field Crystal simulations. Four input parameters must be set by the user and their effect is…

Materials Science · Physics 2018-11-29 Gabriel Martine La Boissoniere , Rustum Choksi

A good quality scaling of the cluster size distributions is obtained for the Lattice Gas Model using the Fisher's ansatz for the scaling function. This scaling identifies a pseudo-critical line in the phase diagram of the model that spans…

Nuclear Theory · Physics 2009-11-07 F. Gulminelli , Ph. Chomaz , M. Bruno , M. D'Agostino

Motivated by the decade-long debate over the issue of criticality supposedly observed in nuclear multifragmentation, we propose a dynamical lattice model to simulate the phenomenon. Its Ising Hamiltonian mimics a short range attractive…

Statistical Mechanics · Physics 2015-06-25 J. S. Sa' Martins , P. M. C. de Oliveira

A simple lattice model is used to study compaction in granular media. As in real experiments, we consider a series of taps separated by large enough waiting times. The relaxation of the density exhibits the characteristic inverse…

Condensed Matter · Physics 2009-10-31 J. Javier Brey , A. Prados , B. Sanchez-Rey

Motivated by lattice mixture identification and grain boundary detection, we present a framework for lattice pattern representation and comparison, and propose an efficient algorithm for lattice separation. We define new scale and shape…

Image and Video Processing · Electrical Eng. & Systems 2024-12-20 Yuchen He , Sung Ha Kang

Droplet nucleation and evaporation are ubiquitous in nature and many technological applications, such as phase-change cooling and boiling heat transfer. So far, the description of these phenomena at the molecular scale has posed challenges…

Fluid Dynamics · Physics 2023-11-28 Panagiotis E. Theodorakis , Y. Wang , A. Chen , B. Liu