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Proteins in photosynthetic membranes can organize into patterned arrays that span the membrane's lateral size. Attractions between proteins in different layers of a membrane stack can play a key role in this ordering, as was suggested by…

Soft Condensed Matter · Physics 2020-09-09 Andreana M. Rosnik , Phillip L. Geissler

A continuum model of crystalline solid equilibrium is presented in which the underlying periodic lattice structure is taken explicitly into account. This model also allows for both point and line defects in the bulk of the lattice and at…

Materials Science · Physics 2009-10-31 Paolo Cermelli , Shaun Sellers

The molecular dynamics lattice gas method maps a molecular dynamics simulation onto a lattice gas using a coarse-graining procedure. This is a novel fundamental approach to derive the lattice Boltzmann method by taking a Boltzmann average…

Computational Physics · Physics 2021-10-04 Aleksandra Pachalieva , Alexander J. Wagner

Lattice constants such as unit cell edge lengths and plane angles are important parameters of the periodic structures of crystal materials. Predicting crystal lattice constants has wide applications in crystal structure prediction and…

Materials Science · Physics 2020-11-02 Yuxin Li , Wenhui Yang , Rongzhi Dong , Jianjun Hu

Crystallization is a fundamental process in materials science, providing the primary route for the realization of a wide range of new materials. Crystallization rates are also considered to be useful probes of glass-forming ability. At the…

Two-dimensional Rydberg atoms are modeled at low temperatures by means of the classical Monte Carlo method. The Coulomb repulsion of charged ions competing with the repulsive van der Waals long-range tail is modeled by a number of…

Quantum Gases · Physics 2019-12-24 Yu. E. Lozovik , I. L. Kurbakov , G. E. Astrakharchik

We describe an approach for empirical modeling of steel phase kinetics based on symbolic regression and genetic programming. The algorithm takes processed data gathered from dilatometer measurements and produces a system of differential…

Machine Learning · Computer Science 2022-12-21 David Piringer , Bernhard Bloder , Gabriel Kronberger

We suggest a Hamiltonian formulation on a momentum lattice using a physically motivated regularization using the Breit-frame which links the maximal parton number to the lattice size. This scheme restricts parton momenta to positive values…

High Energy Physics - Lattice · Physics 2014-11-17 Helmut Kroger , Norbert Scheu

For hamiltonian lattice gauge theory, we introduce the matrix product anzats inspired from density matrix renormalization group. In this method, wavefunction of the target state is assumed to be a product of finite matrices. As a result,…

High Energy Physics - Lattice · Physics 2009-11-10 Takanori Sugihara

We establish links between three different models for multifragmentation: the percolation model, the lattice gas model and the statistical multifragmentation model. There are remarkable similarities between the lattice gas model and the…

Nuclear Theory · Physics 2007-05-23 S. Das Gupta , J. Pan , I. Kvasnikova , C. Gale

The melting and crystallization of Al50Ni50} are studied by means of molecular dynamics computer simulations, using a potential of the embedded atom type to model the interactions between the particles. Systems in a slab geometry are…

Materials Science · Physics 2009-11-13 Ali Kerrache , Juergen Horbach , Kurt Binder

Changes in lattice structure across sub-regions of protein crystals are challenging to assess when relying on whole crystal measurements. Because of this difficulty, macromolecular structure determination from protein micro and nano…

We study the 1D kinetics of diffusion-limited coalescence and annihilation with back reactions and different kinds of particle input. By considering the changes in occupation and parity of a given interval, we derive sets of hierarchical…

Statistical Mechanics · Physics 2009-11-07 E. Abad , T. Masser , D. ben-Avraham

We derive a mesoscopic modeling and simulation technique that is very close to the technique known as dissipative particle dynamics. The model is derived from molecular dynamics by means of a systematic coarse-graining procedure. Thus the…

Soft Condensed Matter · Physics 2009-10-31 Eirik G. Flekkoy , Peter V. Coveney , Gianni De Fabritiis

A part of the theory of dislocations in crystals is revised with the aim to fit it into the framework of the nonlinear theory of plasticity initially designed for amorphous glassy materials.

Mathematical Physics · Physics 2007-05-23 Jeffrey Comer , Ruslan Sharipov

Lattice structures have great potential for several application fields ranging from medical and tissue engineering to aeronautical one. Their development is further speeded up by the continuing advances in additive manufacturing…

Soft Condensed Matter · Physics 2025-01-13 Chiara Pasini , Oscar Ramponi , Stefano Pandini , Luciana Sartore , Giulia Scalet

The understanding of thermodynamic glass transition has been hindered by the lack of proper models beyond mean-field theories. Here, we propose a three-dimensional lattice glass model on a simple cubic lattice that exhibits the typical…

Statistical Mechanics · Physics 2020-08-07 Yoshihiko Nishikawa , Koji Hukushima

New lattice model for the gradient elasticity is suggested. This lattice model gives a microstructural basis for second-order strain-gradient elasticity of continuum that is described by the linear elastic constitutive relation with the…

Materials Science · Physics 2015-01-08 Vasily E. Tarasov

We report a kinetic Monte Carlo modeling study of nanocrystal layer sintering. Features that are of interest for the dynamics of the layer as a whole, especially the morphology of the evolving structure, are considered. It is found that the…

Materials Science · Physics 2014-11-11 Vyacheslav Gorshkov , Vasily Kuzmenko , Vladimir Privman

Magnetic materials with tilted electron spins often exhibit conducting behavior that cannot be explained from semiclassical theories without invoking fictitious (emergent) electromagnetic fields. Quantum-mechanical models explaining such…

Strongly Correlated Electrons · Physics 2024-02-02 Kamil K. Kolincio , Max Hirschberger , Jan Masell , Taka-hisa Arima , Naoto Nagaosa , Yoshinori Tokura
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