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Random walks on multidimensional nonlinear landscapes are of interest in many areas of science and engineering. In particular, properties of adaptive trajectories on fitness landscapes determine population fates and thus play a central role…

Populations and Evolution · Quantitative Biology 2014-10-08 Michael Manhart , Alexandre V. Morozov

We describe systems using Kauffman and similar networks. They are directed funct ioning networks consisting of finite number of nodes with finite number of discr ete states evaluated in synchronous mode of discrete time. In this paper we…

Disordered Systems and Neural Networks · Physics 2009-11-13 Andrzej Gecow

In order to accommodate the empirical fact that population structures are rarely simple, modern studies of evolutionary dynamics allow for complicated and highly-heterogeneous spatial structures. As a result, one of the most difficult…

Populations and Evolution · Quantitative Biology 2022-07-07 Alex McAvoy , John Wakeley

We study linear spectral statistics of high dimensional sample covariance matrices in a regime where the empirical spectral distribution remains governed by the classical sample covariance law but the fluctuation theory is nonclassical. Our…

Statistics Theory · Mathematics 2026-05-13 Yanqing Yin , Wang Zhou

Future large scale structure surveys will provide increasingly tight constraints on our cosmological model. These surveys will report results on the distance scale and growth rate of perturbations through measurements of Baryon Acoustic…

Cosmology and Nongalactic Astrophysics · Physics 2016-12-07 Martin White

Latent Gaussian models and boosting are widely used techniques in statistics and machine learning. Tree-boosting shows excellent prediction accuracy on many data sets, but potential drawbacks are that it assumes conditional independence of…

Machine Learning · Computer Science 2022-08-24 Fabio Sigrist

Gaussian graphical models (GGMs) are well-established tools for probabilistic exploration of dependence structures using precision matrices. We develop a Bayesian method to incorporate covariate information in this GGMs setup in a nonlinear…

This paper addresses the statistical significance of structures in random data: Given a set of vectors and a measure of mutual similarity, how likely does a subset of these vectors form a cluster with enhanced similarity among its elements?…

Molecular Networks · Quantitative Biology 2015-05-19 Marta Łuksza , Michael Lässig , Johannes Berg

In order to conduct a statistical analysis on a given set of phylogenetic gene trees, we often use a distance measure between two trees. In a statistical distance-based method to analyze discordance between gene trees, it is a key to decide…

Populations and Evolution · Quantitative Biology 2016-02-05 Jing Xi , Jin Xie , Ruriko Yoshida

Weak gravitational lensing by galaxy clusters on faint higher redshift galaxies has been traditionally used to study the cluster mass distribution and as a tool to identify clusters as peaks in the shear maps. However, it becomes soon clear…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-04 V. F. Cardone , S. Camera , R. Mainini , A. Romano , A. Diaferio , R. Maoli , R. Scaramella

We present a brief introduction to the statistical properties of systems with large fluctuations. We point out that for such systems the relevant statistical quantities are scaling exponents and the nature of fluctuations is completely…

Astrophysics · Physics 2007-05-23 Francesco Sylos Labini , Andrea Gabrielli

One approach to estimating a species tree from a collection of gene trees is to first estimate probabilities of clades from the gene trees, and then to construct the species tree from the estimated clade probabilities. While a greedy…

Populations and Evolution · Quantitative Biology 2012-11-14 Elizabeth S. Allman , James H. Degnan , John A. Rhodes

Representations of population models in terms of countable systems of particles are constructed, in which each particle has a `type', typically recording both spatial position and genetic type, and a level. For finite intensity models, the…

Probability · Mathematics 2018-06-05 Alison M. Etheridge , Thomas G. Kurtz

The time-evolving precision matrix of a piecewise-constant Gaussian graphical model encodes the dynamic conditional dependency structure of a multivariate time-series. Traditionally, graphical models are estimated under the assumption that…

Methodology · Statistics 2017-11-01 Alexander J. Gibberd , James D. B. Nelson

Spectral clustering is a powerful method for finding structure in a dataset through the eigenvectors of a similarity matrix. It often outperforms traditional clustering algorithms such as $k$-means when the structure of the individual…

Numerical Analysis · Mathematics 2019-04-26 Paola Favati , Grazia Lotti , Ornella Menchi , Francesco Romani

It has been shown that differences in fecundity variance can influence the probability of invasion of a genotype in a population, i.e. a genotype with lower variance in offspring number can be favored in finite populations even if it has a…

Populations and Evolution · Quantitative Biology 2007-05-23 Max Shpak

Evolutionary games on graphs describe how strategic interactions and population structure determine evolutionary success, quantified by the probability that a single mutant takes over a population. Graph structures, compared to the…

Populations and Evolution · Quantitative Biology 2017-05-08 Philipp M. Altrock , Arne Traulsen , Martin A. Nowak

We explore various Bayesian approaches to estimate partial Gaussian graphical models. Our hierarchical structures enable to deal with single-output as well as multiple-output linear regressions, in small or high dimension, enforcing either…

Methodology · Statistics 2021-12-14 Eunice Okome Obiang , Pascal Jézéquel , Frédéric Proïa

In this article pattern statistics of typical cubical cut and project sets are studied. We give estimates for the rate of convergence of appearances of patches to their asymptotic frequencies. We also give bounds for repetitivity and…

Dynamical Systems · Mathematics 2017-02-15 Alan Haynes , Antoine Julien , Henna Koivusalo , James Walton

Diffusion models have become a leading framework in generative modeling, yet their theoretical understanding -- especially for high-dimensional data concentrated on low-dimensional structures -- remains incomplete. This paper investigates…

Machine Learning · Computer Science 2026-04-29 Zixuan Zhang , Kaixuan Huang , Tuo Zhao , Mengdi Wang , Minshuo Chen