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Modern high-performance computing architectures (Multicore, GPU, Manycore) are based on tightly-coupled clusters of processing elements, physically implemented as rectangular tiles. Their size and aspect ratio strongly impact the achievable…

Hardware Architecture · Computer Science 2022-09-05 Gianna Paulin , Matheus Cavalcante , Paul Scheffler , Luca Bertaccini , Yichao Zhang , Frank Gürkaynak , Luca Benini

Reactive molecular dynamics simulations are computationally demanding. Reaching spatial and temporal scales where interesting scientific phenomena can be observed requires efficient and scalable implementations on modern hardware. In this…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-26 Hasan Metin Aktulga , Christopher Knight , Paul Coffman , Kurt A. O'Hearn , Tzu-Ray Shan , Wei Jiang

I describe here the performances of a parallel treecode with individual particle timesteps. The code is based on the Barnes-Hut algorithm and runs cosmological N-body simulations on parallel machines with a distributed memory architecture…

Astrophysics · Physics 2007-05-23 R. Valdarnini

Among the algorithms that are likely to play a major role in future exascale computing, the fast multipole method (FMM) appears as a rising star. Our previous recent work showed scaling of an FMM on GPU clusters, with problem sizes in the…

Numerical Analysis · Computer Science 2012-10-30 Rio Yokota , Lorena Barba

We present the results of gravitational direct $N$-body simulations using the commercial graphics processing units (GPU) NVIDIA Quadro FX1400 and GeForce 8800GTX, and compare the results with GRAPE-6Af special purpose hardware. The force…

Astrophysics · Physics 2008-11-26 Simon Portegies Zwart , Robert Belleman , Peter Geldof

In this study, the gravitational octree code originally optimized for the Fermi, Kepler, and Maxwell GPU architectures is adapted to the Volta architecture. The Volta architecture introduces independent thread scheduling requiring either…

Mathematical Software · Computer Science 2018-11-08 Yohei Miki

The modern study of the dynamics of stellar systems requires the use of high-performance computers. Indeed, an accurate modelization of the structure and evolution of self-gravitating systems like planetary systems, open clusters, globular…

Astrophysics · Physics 2015-06-10 R. Capuzzo-Dolcetta , P. Di Matteo , P. Miocchi

We report results of collisional N-body simulations aimed to study the N-dependance of the dynamical evolution of star clusters. Our clusters consist of equal-mass stars and are in virial equilibrium. Clusters moving in external tidal…

Astrophysics · Physics 2009-10-31 H. Baumgardt

Analysis of large galaxy surveys requires confidence in the robustness of numerical simulation methods. The simulations are used to construct mock galaxy catalogs to validate data analysis pipelines and identify potential systematics. We…

We present a novel, highly efficient algorithm to parallelize O(N^2) direct summation method for N-body problems with individual timesteps on distributed-memory parallel machines such as Beowulf clusters. Previously known algorithms, in…

Astrophysics · Physics 2009-11-07 Junichiro Makino

We present Occamy, a 432-core RISC-V dual-chiplet 2.5D system for efficient sparse linear algebra and stencil computations on FP64 and narrow (32-, 16-, 8-bit) SIMD FP data. Occamy features 48 clusters of RISC-V cores with custom…

This Article presents two optimized multi-GPU algorithms for Fock matrix construction, building on the work of Ufimtsev et al. and Barca et al. The novel algorithms, opt-UM and opt-Brc, introduce significant enhancements, including improved…

Computational Physics · Physics 2024-08-01 Elise Palethorpe , Ryan Stocks , Giuseppe M. J. Barca

We present the first detailed comparison between million-body globular cluster simulations computed with a H\'enon-type Monte Carlo code, CMC, and a direct $N$-body code, NBODY6++GPU. Both simulations start from an identical cluster model…

Instrumentation and Methods for Astrophysics · Physics 2016-08-31 Carl L. Rodriguez , Meagan Morscher , Long Wang , Sourav Chatterjee , Frederic A. Rasio , Rainer Spurzem

Upcoming Large Scale Structure surveys aim to achieve an unprecedented level of precision in measuring galaxy clustering. However, accurately modeling these statistics may require theoretical templates that go beyond second-order…

Cosmology and Nongalactic Astrophysics · Physics 2023-11-21 M. Icaza-Lizaola , Yong-Seon Song , Minji Oh , Yi Zheng

Cosmological N-body simulations are crucial for understanding how the Universe evolves. Studying large-scale distributions of matter in these simulations and comparing them to observations usually involves detecting dense clusters of…

Astrophysics of Galaxies · Physics 2019-12-25 Aidan Reilly , Nikita Ivkin , Gerard Lemson , Vladimir Braverman , Alexander Szalay

In this study we use simulations of 128$^3$ particles to study the ellipticity and orientation of clusters of galaxies in N-body simulations of differing power-law initial spectra (P(k) \propto k^n ,n = +1, 0, -1, -2$), and density…

Astrophysics · Physics 2016-08-30 Randall J. Splinter , Adrian L. Melott , Angela Linn , Charles Buck , Jeremy Tinker

The presence of protostellar disks can greatly increase the dissipation during close stellar encounters, leading to the formation of a significant population of binaries during the initial collapse and virialization of a cluster. We have…

Astrophysics · Physics 2015-06-24 S. D. Murray , C. J. Clarke

Modeling of interacting galaxies suffers from an extended parameter space prohibiting traditional grid based search strategies. As an alternative approach a combination of a Genetic Algorithm (GA) with fast restricted N-body simulations can…

Astrophysics · Physics 2007-05-23 Christian Theis , Stefan Harfst

The steeply growing performance demands for highly power- and energy-constrained processing systems such as end-nodes of the internet-of-things (IoT) have led to parallel near-threshold computing (NTC), joining the energy-efficiency…

Hardware Architecture · Computer Science 2020-04-15 Florian Glaser , Giuseppe Tagliavini , Davide Rossi , Germain Haugou , Qiuting Huang , Luca Benini

Molecular dynamics facilitates the simulation of a complex system to be analyzed at molecular and atomic levels. Simulations can last a long period of time, even months. Due to this cause the graphics processing units (GPUs) and multi-core…

Computational Physics · Physics 2021-02-02 Iuliana Marin , Nicolae Goga , Maria Goga
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