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The gravitationally-driven evolution of cold dark matter dominates the formation of structure in the Universe over a wide range of length scales. While the longest scales can be treated by perturbation theory, a fully quantitative…

Astrophysics · Physics 2009-11-10 Katrin Heitmann , Paul M. Ricker , Michael S. Warren , Salman Habib

A detailed comparative qualitative analysis and numerical simulation of evolution of the cosmological models based on the doublet of classical and phantom scalar fields with self-action. The 2-dimensional and 3-dimensional projections of…

General Relativity and Quantum Cosmology · Physics 2018-10-24 Yurii Ignat'ev , Alexander Agathonov , Irina Kokh

Numerical methods have become a powerful tool for research in astrophysics, but their utility depends critically on the availability of suitable simulation codes. This calls for continuous efforts in code development, which is necessitated…

Instrumentation and Methods for Astrophysics · Physics 2021-08-19 Volker Springel , Rüdiger Pakmor , Oliver Zier , Martin Reinecke

We present $\texttt{MG-evolution}$, an $N$-body code simulating the cosmological structure formation for parametrised modifications of gravity. It is built from the combination of parametrised linear theory with a parametrisation of the…

Cosmology and Nongalactic Astrophysics · Physics 2022-05-03 Farbod Hassani , Lucas Lombriser

In this work we study the cosmological simulations as a tool to understand the formation of large-scale structure of the universe, for this, we show the equivalence of Newtonian cosmology with Poisson gauge and we study the solution of the…

Astrophysics of Galaxies · Physics 2014-09-05 J. E. García Farieta , L. Castañeda , J. M. Tejeiro

In this paper we review the importance of the Lyman alpha forest as a probe of structure formation in the universe. We first discuss the statistics used to describe the Lyman alpha forest and the numerical techniques used to produce…

Astrophysics · Physics 2007-05-23 Marie E. Machacek , Greg L. Bryan , Peter Anninos , Avery Meiksin , Michael L. Norman

A combined N--body/SPH code is presented which benefits from the high speed of the special purpose hardware GRAPE (GRAvity PipE). Besides gravitational forces, GRAPE also returns the list of neighbours and can, therefore, be used to speed…

Astrophysics · Physics 2015-06-24 Matthias Steinmetz

In the past decade, a small corner of the fly's visual system has become an important testing ground for ideas about coding and computation in the nervous system. A number of results demonstrate that this system operates with a precision…

Biological Physics · Physics 2007-05-23 Rob de Ruyter van Steveninck , Alexander Borst , William Bialek

Speculative decoding is a technique to leverage hardware concurrency in order to enable multiple steps of token generation in a single forward pass, thus improving the efficiency of large-scale autoregressive (AR) Transformer models.…

Machine Learning · Computer Science 2025-10-29 Yangchao Wu , Zongyue Qin , Alex Wong , Stefano Soatto

The distribution of absorption lines in the spectra of distant quasars, called the Lyman-$\alpha$ (Ly-$\alpha$) forest, is a unique probe of cosmology and the intergalactic medium at high redshifts and small scales. The statistical power of…

Cosmology and Nongalactic Astrophysics · Physics 2025-07-02 Roger de Belsunce , Mikhail M. Ivanov , James M. Sullivan , Kazuyuki Akitsu , Shi-Fan Chen

In this paper, we study the parallel query complexity of reconstructing biological and digital phylogenetic trees from simple queries involving their nodes. This is motivated from computational biology, data protection, and computer…

Data Structures and Algorithms · Computer Science 2020-09-10 Ramtin Afshar , Michael T. Goodrich , Pedro Matias , Martha C. Osegueda

This paper presents a novel approach to multiple access control called coded splitting tree protocol. The approach builds on the known tree splitting protocols, code structure and successive interference cancellation (SIC). Several…

Information Theory · Computer Science 2013-01-31 Jesper H. Sørensen , Cedomir Stefanović , Petar Popovski

We present a hydrodynamical code for cosmological simulations which uses the Piecewise Parabolic Method (PPM) to follow the dynamics of gas component and an N-body Particle-Mesh algorithm for the evolution of collisionless component. The…

Astrophysics · Physics 2009-10-30 Claudio Gheller , Ornella Pantano , Lauro Moscardini

The evolution of an isolated over-density represents a useful toy model to test the accuracy of a cosmological N-body code in the non linear regime as it is approximately equivalent to that of a truly isolated cloud of particles, with same…

Cosmology and Nongalactic Astrophysics · Physics 2013-10-07 Francesco Sylos Labini

Numerical simulations are becoming a more effective tool for conducting detailed investigations into the evolution of our universe. In this article, we show how the framework of numerical relativity can be used for studying cosmological…

General Relativity and Quantum Cosmology · Physics 2014-03-13 David Garrison

In this paper we describe our massively parallel version of Enzo, a multiphysics, parallel, AMR application for simulating cosmological structure formation developed at UCSD and Columbia. We describe its physics, numerical algorithms,…

Evolution is a process that is influenced by various environmental factors, e.g. the interactions between different species, genes, and biogeographical properties. Hence, it is interesting to study the combined evolutionary history of…

Quantitative Methods · Quantitative Biology 2013-08-02 Nicolas Wieseke , Matthias Bernt , Martin Middendorf

Safety-critical infrastructures must operate in a safe and reliable way. Fault tree analysis is a widespread method used for risk assessment of these systems: fault trees (FTs) are required by, e.g., the Federal Aviation Administration and…

Logic in Computer Science · Computer Science 2025-08-05 Stefano M. Nicoletti , Milan Lopuhaä-Zwakenberg , E. Moritz Hahn , Mariëlle Stoelinga

While classical skyline queries identify interesting data within large datasets, flexible skylines introduce preferences through constraints on attribute weights, and further reduce the data returned. However, computing these queries can be…

Databases · Computer Science 2025-01-08 Emilio De Lorenzis , Davide Martinenghi

A non-local model describing the growth of a tree-like transportation network with given allocation rules is proposed. In this model we focus on tree like networks, and the network transports the very resource it needs to build itself. Some…

Adaptation and Self-Organizing Systems · Physics 2019-07-24 Olivier Bui , Xavier Leoncini